Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0087 |
Symbol | |
ID | 6355611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 93045 |
End bp | 95129 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642667711 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_001942172 |
Protein GI | 189345643 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.4836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATA ACCTGTTCAA ACCATCAAAT CCTTACAGAA AAGAACCGGA AACCAACGAA CGACGCCCGA AATTTTCCAT AATGTACTAT CTGGTGGTGA TTCTGCTGCT GATAGGCATA CAGCTTGCTT TTTTCTGGTC CGGCTCATCG GTGGAAATCC CCTATAGCAC CTTTCGCAAA TACATTGCAG AAAACAAGGT CGAATCGGTG AGAATATCTC CCGAGAGAAT CTTCGTCGTG CTCAAACCCG AGGCAAAACC TGTCGTGACT GCGCCCGAAC CTCCTAAAGA CGGCCCGGGA ATATTTATGC CCCGTTCGTC AACGCCGTCC AACGAGATCT TCGTCACCCC GGTACGAGAT GATACGCTCG TCGAGCTGCT CGAAAGCAAG GGCATAAAAT ATCAGGGCAT GCCGAGCAAC ACCTGGCTGG GCGAACTGCT GCAGTGGATA CTTCCGTTCG CCTTGCTGAT AGGCATCTAT TTTTTTGTTT TCCGGCGTAT GGGCGGACCT GGATCGCAGT TCATGAACAT CGGCAAAAAC AAAGCCGCGC TTTATGAAAA CCTCGACGAA CACACCCGCA TCACCTTCAA GGATGTAGCC GGACTCGACG AAGTAAAAGC TGAGGTCATG GAGGTCGTCG ACTTCCTGAA AGACCCGAAA AAATATACAA AACTCGGCGG CAAGCTGCCC AAAGGCGTAC TGCTGGTAGG CCCTCCCGGT ACTGGCAAAA CCCTTCTGGC CAAAGCCGTT GCCGGCGAGG CGGAAGTGCC GTTCTTCAGC ATCAGCGGTT CCGACTTCGT GGAAATGTTT GTGGGCGTCG GAGCGGCAAG AGTGCGCGAC CTGTTCCGCC AGGCAAAAGA GAAAGCCCCC TGCATCATTT TTATCGATGA AATAGACGCC GTAGGCAGAA GTCGAGGCAA AGGCGCCATG ATGGGAGCGA ACGACGAGCG GGAAAACACG CTCAATCAGC TTCTGGTGGA AATGGACGGC TTTGCTACCG ACAAGGGGGT CATCCTCATG GCGGCGACCA ACCGGCCCGA TGTGCTTGAC TCGGCCCTGC TGCGTCCCGG ACGCTTCGAC CGCCAGATCA TGGTCGACAA GCCCGATCTG AAAGGCCGTA TCGATATTTT CAAGGTGCAC ACCAAGAACC TCTCGCTCTC TCCGGATGTA AACCTGAAAA CGCTTGCCTC GCAGACTCCC GGTTTTGCCG GTGCGGAAAT CGCCAATGCC GCCAATGAAG CCGCCCTGCT TGCCTCGCGC CGCGAAAAGC AGAGCATCGA AATGAAAGAC TTCGAAGATG CCATCGAACG TGTGGTAGCA GGACTTGAAA AGAAAAACAA GGTCATCAAC CCGCGCGAAA GGCAGATAGT CGCCTACCAT GAAGCCGGCC ACGCCATTGT GAGCTGGATG ATGCCCGAAA ACGATCCGGT ACAGAAAATT TCGATCGTTC CGCGAGGTAT GAGCGCGCTC GGCTACACCA TGAACATTCC GCTTGAAGAC CGTTACCTCA TGACGAAAAG GGAACTCTTC GCTCGAATCT GCGGCCTGCT TGGCGGACGC ATTGCCGAGG AGATCATCTT CAGCGAAATA TCAACCGGCG CGCAGAACGA CCTTGAAAAA ATTACCGGAA TAGCCTATAA CATGGTGCTG GTTTACGGCA TGAGCGAACG GCTCGGCAAC CTCTCCTTCT ATGAGAGCAA CAATCCCTAT TCGGGCGGAC CAGGCATCGA CAAGAAGTAC AGCGAGAAAA CCGCTCAACT GATCGACAGC GAGGTCAAGG TCATCGAGGA AAAAGCCCGC CAGACGGTAA CCGATCTGCT GACGCTCAAT CGCGACAAGC TCGAGGCTCT CGCACGCGAG CTTCTGGCCA AAGAGATGCT GCAGTACTGC CAGATCGAGG AAATTCTCGG CAAACGTCCT GAGGGAGGAT TCCCCGCTCA TCTGCATACG GAGTGCAACG GAAACGGAAC CCGTCAGGAA ACCGCTGAAG AGCCGGAGAT CCCGGTCATA AGCAGTGAAG AACGTCTTGA ACTCGAAGCC GCCGTTGCAC GGCTGAAGGA AAACCGGGAA CAACCGGAAA CCTGA
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Protein sequence | MANNLFKPSN PYRKEPETNE RRPKFSIMYY LVVILLLIGI QLAFFWSGSS VEIPYSTFRK YIAENKVESV RISPERIFVV LKPEAKPVVT APEPPKDGPG IFMPRSSTPS NEIFVTPVRD DTLVELLESK GIKYQGMPSN TWLGELLQWI LPFALLIGIY FFVFRRMGGP GSQFMNIGKN KAALYENLDE HTRITFKDVA GLDEVKAEVM EVVDFLKDPK KYTKLGGKLP KGVLLVGPPG TGKTLLAKAV AGEAEVPFFS ISGSDFVEMF VGVGAARVRD LFRQAKEKAP CIIFIDEIDA VGRSRGKGAM MGANDERENT LNQLLVEMDG FATDKGVILM AATNRPDVLD SALLRPGRFD RQIMVDKPDL KGRIDIFKVH TKNLSLSPDV NLKTLASQTP GFAGAEIANA ANEAALLASR REKQSIEMKD FEDAIERVVA GLEKKNKVIN PRERQIVAYH EAGHAIVSWM MPENDPVQKI SIVPRGMSAL GYTMNIPLED RYLMTKRELF ARICGLLGGR IAEEIIFSEI STGAQNDLEK ITGIAYNMVL VYGMSERLGN LSFYESNNPY SGGPGIDKKY SEKTAQLIDS EVKVIEEKAR QTVTDLLTLN RDKLEALARE LLAKEMLQYC QIEEILGKRP EGGFPAHLHT ECNGNGTRQE TAEEPEIPVI SSEERLELEA AVARLKENRE QPET
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