| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0072 |
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| Symbol | |
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| ID | 6355595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 76218 |
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| End bp | 78302 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642667695 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_001942157 |
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| Protein GI | 189345628 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGAAG CCAGCACGCT CATGCAGTAT ATCAGCGATG CGGTGGGTTC CATACGCGAT
CCGCAGGAGC TGTTCCGGAC GGTGACCGAC AAGCTGCGCC TGGTTTTCGA ATTCGATTCG
GCGGTTATCA TCACCTTCGA CCGCGACAGG CGCTACATCA ATGTTTTTTT CGAAATGCTT
CGTTTCGAGC TTCCCGATTC CGTTCGGCGT AAAAAACGGC CTATAGCGGG TTCGTGGATC
GAACCGCATC TCGGCGATAC CACCGTGTCG GTGCTCTCCA TAGAGGGCGA ACTCAACCGT
TATCCTTCTG ATTTCCCTGT TCCTGGCATG CTTTACGATC TTGGCATGCG GCAGGTGGTG
CTCTCGCCTC TGCGTTCCGG CGGCAAGGTG ATCGGTTTTC TGAATTTTGT TTCGAAGCGG
GAAAAGATAT GGTCGGAAGG CGAAAAGGAG CTGCTCACCA CCCTTTCGGC GCCTATCGCC
GTCGCGGTCA GCAATGCCCT TGCCTATGAG GAACTGCGTC AGAGCGAAGC CCAGATATCC
ATGCAGCTTG CCGTGAACAA CGCGCTGCTT ACCATACGGG ATCGCAGCCG TATGATGCTT
GCCGTCTGCG AGCAGATCGA CCGGCTGGTA CCCTGCACGT TTCTCGGCAT ACGGGTAATG
CAGAGCGACG GCGATTACCG GGTGTTCGAT AATTTCATGA GGGAACCCTC AGGATCGTTT
GCCCCTGTCC TCTCCTACGA TCATTTCGGC ATATCGGATT TCAGGGAGAT CGCCAAAGAG
AGTTTTGCGC TTATCTCCAA TCCCGGTTGC TATTCCGGAG CGGATTTCGA GCGGCTCTGC
CGGCAGTATC GGCTTGTTGC TCTGGTGCGT GAAAAACTCG GCGTCTGTTC GGTTATCAGC
GCCAGCCTGT GGGACTCCCC CGGCAGCCGC GCCGGACTGA TCATTTCGGA TACCAGGAGG
TCTTTCGACG AGCATGACCT GCAGACGGTG AGCCTCGTTG TGCCGCAGCT CTCGCTTGCG
CTGCAGAACT TTCTTGCCTA TGAGGATATC GACGAGCTTC GCGGGCGACT GGAGGGCGAG
CGGACATGGC TGATCGAGGA AATCAAGGGG GCGCATGCTT TCGAGGAGAT TATCGGCAGC
AGCGCCGCGC TTGCGGCCGC CCTGCGAAGG GTGAGCCAGG TTGCGCCGAC CGACGCGACC
GTACTGATCC AGGGGGAAAC CGGTACAGGC AAGGAGCTGT TCGCACGGGC CATCCACAAT
CTTTCTTCAC GCCGGGAGAA AGTGATGGTG AAGGTGAACT GCGCAGCGCT TCCGGCAGCG
CTGATAGAGT CGGAGCTGTT CGGACATGAA AAGGGCAGTT TCACCGGAGC GACGGAGCGC
AGGATCGGCA AGTTCGAGCT TGCCGCCGGA GGGACGATTT TTCTCGACGA GATCGGCGAG
CTGCCGCTGG AGCTTCAGGC CAAGCTGCTT CGCGTGCTGC AGGAGAGAGA ACTGGAGCGG
CTCGGCGGAA GCCGGGTCAT TCAGGTGGAT GTGCGCGTGA TTGCCGCTAC GAACCGCGAT
CTCGATGCGG AGGTCGCCGC CGGCCGGTTC CGCGAAGACC TTTATTTCAG GCTCAACGTG
TTTCCTCTCG CCGTTCCTCC CCTGCGGGAG AGGCGGGACG ATATTGCCCT GCTTGCCGCC
CACTTCGCTG CACGTTACGC CCGCGAATTC GGACGGCAGA CTCTGCCGTT CCGGCAGAGC
GATCTCCTGC GGCTCGAAGG GCGCGAGTGG AAAGGCAACA TCCGCGAACT GGCCCACCTG
ATCGAGCAGG TGGTGATCGT TTCCGAAGGG CCATCGCTCG ACTTCTCCTC CATCCTTTCG
CCCGAAACTT CCGCTGCCGG GAACCGGACG ACGGAAAGGG TAAAGAGCAT GCGCGATTTC
GAGTCGGAGA TGCTCATGCT CGAGCGGGAG CTGATACTCG ATGCGCTCGA ACGGTCGGGA
GGTCGGGTCA GCGGCGAGGG CGGAGCAGCG GAACGGCTCG ACATGCATCC GAAGACTCTC
TACTCCCGCA TCGACAAGCT GGGGTTGAGG AAGAGGTATG GGTAA
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| Protein sequence | MHEASTLMQY ISDAVGSIRD PQELFRTVTD KLRLVFEFDS AVIITFDRDR RYINVFFEML
RFELPDSVRR KKRPIAGSWI EPHLGDTTVS VLSIEGELNR YPSDFPVPGM LYDLGMRQVV
LSPLRSGGKV IGFLNFVSKR EKIWSEGEKE LLTTLSAPIA VAVSNALAYE ELRQSEAQIS
MQLAVNNALL TIRDRSRMML AVCEQIDRLV PCTFLGIRVM QSDGDYRVFD NFMREPSGSF
APVLSYDHFG ISDFREIAKE SFALISNPGC YSGADFERLC RQYRLVALVR EKLGVCSVIS
ASLWDSPGSR AGLIISDTRR SFDEHDLQTV SLVVPQLSLA LQNFLAYEDI DELRGRLEGE
RTWLIEEIKG AHAFEEIIGS SAALAAALRR VSQVAPTDAT VLIQGETGTG KELFARAIHN
LSSRREKVMV KVNCAALPAA LIESELFGHE KGSFTGATER RIGKFELAAG GTIFLDEIGE
LPLELQAKLL RVLQERELER LGGSRVIQVD VRVIAATNRD LDAEVAAGRF REDLYFRLNV
FPLAVPPLRE RRDDIALLAA HFAARYAREF GRQTLPFRQS DLLRLEGREW KGNIRELAHL
IEQVVIVSEG PSLDFSSILS PETSAAGNRT TERVKSMRDF ESEMLMLERE LILDALERSG
GRVSGEGGAA ERLDMHPKTL YSRIDKLGLR KRYG
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