Gene Clim_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0068 
Symbol 
ID6355591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp71573 
End bp73159 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content61% 
IMG OID642667691 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_001942153 
Protein GI189345624 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGCT CCGGAGCGGC AGCGACGCTG CACACTTACG AAACCGGCGC GAGGCGTATC 
ATCATTACCC TCACGGTAAT CGTTTCGGCC ATGCTCGAAC TGATCGACAC CACCATCGTG
AACGTGGCCA TCACGCAGAT CAGCGGCAAC CTCGGCGCCA GCATCGAAGA CGTCGCCTGG
GTGGTCACCA GCTACGCCAT CGCCAACGTC ATCGTCATCC CGCTCTCGGG CTTTCTCGGC
AATCTGCTCG GCCGACGCAA CTACTACATC GGTTCGATAC TGCTCTTCAC GGCGGCCTCG
CTGCTCTGCG GCCTTGCCAC CGACATCTGG ACGCTGGTCT TCTTCCGTTT TCTGCAGGGC
ATCGGCGGCG GAGCGCTGCT TCCCACCTCC CAGGCCATCC TTTACGAAAC CTACCCTCCT
GAAGACCGCG GCAAGGCAAC CGGCATCTTT TCCATGGGCC TCGTGCTCGG CCCAACCTTC
GGCCCGCTGC TCGGAGGCTT TCTGGTGGAC AACCTCAACT GGGAATGGTG CTTTTTCGTG
AACATTCCGG TCGGACTGCT CGCCGCATGG TCGGCGTTCT CGTTCATCAG GGAACCGAAA
ACCCAGCACA AGGTCACAAA AATCGACTGG GCAGGCATCG GCCTACTGGC TCTCGGCATC
GGATCGCTGC AGTTCATTCT CGAGCGGGGA GAGTCGAAGG ACTGGTTCGA AACGCCATAC
ATCACCTGGT TCACCATCAT CGCCGTGGTA TCGCTGCTGC TCTTCGTCTG GTGGGAGCTG
CGGGTCGATG AACCCGCCGT CGATCTCAGC GTGCTCGGAA GGAGCCACAA CCTGGCCATA
GCCGCCGTAC TGACCTTCGT GGTCGGCTAC GGACTCTACG GCTCGCTCTT CGTCTTTCCG
GTTTTCGTGC AGCACCTTCT CGGCTTTTCG GCCCTCCTGA CCGGTACGGT GCTCTTTCCC
AGCGCGCTCG TAACCGGCAT CATAGCGCTC CCCCTCGGCA TCGCCCTGCA GCGGGGAGCA
TCGGCGAAAA TCCTCATGAC CGTCGGCATG GCGGCATTTG CCCTCTTCTG CTGGGAACTC
GGCCAGCAGA CCATGCAGTC GGGCGCCGAA AACTTTTTCT GGATACTGCT GCTTCGCGGC
GTCGCCCTCG GCTTCATTTT CATTCCCGTC ACCATGCTTG CCGTCGCCGG ACTGCACGGC
AAGGACATCG GGCAGGCAAC CGGCCTCAAC AACATGGTTC GCCAGCTCGG CGGCTCGTTC
GGCATTGCGA TCACCAACAC CTATATCGTC AAGCGGGTGG CCGAACATCG CAGCGAACTC
CTGAGCCACC TTTCGCCCTA CGACCCGGCA GCCGTCGAAC GCCTGAACGG CATCGCACAG
GCGGCGCAGT CGCGCATGCT CTCGCCGGTA GAGGCCGAGC ATGCCTCGCT CAAAGCGCTT
GAAGGCACTC TCACCGCCCA GAGCTACCAC CTCGCCTACA TGGACGCCTT CATGCTGATC
GCCCTGCTCT TCGCGCTCTC GATGCCGCTG CTGCTGTTCA TCAGAATTAA AAAAGGGGAA
AAAGCCGACC TGTCACAGGC ACACTGA
 
Protein sequence
MNGSGAAATL HTYETGARRI IITLTVIVSA MLELIDTTIV NVAITQISGN LGASIEDVAW 
VVTSYAIANV IVIPLSGFLG NLLGRRNYYI GSILLFTAAS LLCGLATDIW TLVFFRFLQG
IGGGALLPTS QAILYETYPP EDRGKATGIF SMGLVLGPTF GPLLGGFLVD NLNWEWCFFV
NIPVGLLAAW SAFSFIREPK TQHKVTKIDW AGIGLLALGI GSLQFILERG ESKDWFETPY
ITWFTIIAVV SLLLFVWWEL RVDEPAVDLS VLGRSHNLAI AAVLTFVVGY GLYGSLFVFP
VFVQHLLGFS ALLTGTVLFP SALVTGIIAL PLGIALQRGA SAKILMTVGM AAFALFCWEL
GQQTMQSGAE NFFWILLLRG VALGFIFIPV TMLAVAGLHG KDIGQATGLN NMVRQLGGSF
GIAITNTYIV KRVAEHRSEL LSHLSPYDPA AVERLNGIAQ AAQSRMLSPV EAEHASLKAL
EGTLTAQSYH LAYMDAFMLI ALLFALSMPL LLFIRIKKGE KADLSQAH