Gene Clim_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0036 
Symbol 
ID6355559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp43734 
End bp44690 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content55% 
IMG OID642667661 
Productprotein of unknown function DUF81 
Protein accessionYP_001942123 
Protein GI189345594 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000168122 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCAG CCGGCAGCAA TAAACTCCTT CCAGTTCTCT GTACTGTACT GCCGGCAGTC 
ATCCTGCTGC TGCTGCCGCC CGATCTTCTG GCAGCCTCGC TTCCGCCGGC CGCTCCAACG
GCCTGGTGGA TCTGGGTGCT GCTTCTTTTT GTCTTTTCCT TTTTTCTTGG AATCGTTTCC
GTTCTCGCCG GTGTCGGCGG AGGGGTGCTT TTTGTTCCTA TTGTGAGCAG TTTTTTCCCT
TTTCATCTCG ATTTCGTTCG CGGAGCCGGG TTGCTGGTAG CGCTTTCCGG GGCTCTTTCC
GCAGGTCCGT CTCTGCTGAG AAAAGGGCTT GCCGATCTGA AACTCAGCCT TCCGCTCTCC
CTTATCGGCT CTGTCAGCTC GATTGCCGGA GCTATCGCAG GTCTCATGAT GTCCGCGGAC
AGCGTACAGC TTCTTCTGGG AATTGCCATT ATTTCCATTG CAGCCATCAT GATGAAAGCC
GGAAAATCCG GCTATCCGGA AGTCGGCGAG TCTGACGTGA TCGCGAAAGC TCTCGGTATT
TCCGGGAGTT ATTATGAACC GACTATCGAC GAAACCGTCA ACTGGAAAGT TCATCGTACC
CCGGTGGGAC TGGTGCTGTT TTTCTTTATC GGTTTTATCG GAGGCATGTT CGGCATGGGT
GCGGGCTGGG CAAATGTGCC CGTGCTCAAT CTTCTTATGG GAGCCCCGCT CAAGGTTGCC
GTGGCCACAA GCGGGCTGGT GCTCTCCATG AACGGAGCCG CCGCGGCCTG GATCTACCTG
TACAAAGGCG CCGTGCTTCC GTTGATTGCC GTGCCGGCTG TCGGCGGGGT TATGCTTGGC
TCGAAGATAG GAGCAAGAAT GCTCACGAAG GTCAACACCG GTTCGGTACG CATTGTCGTG
ATTGTCATGA TGGTCATAGC CGGAGTTCGT TCAATTATAA AAGGGATGGG GCTATGA
 
Protein sequence
MRAAGSNKLL PVLCTVLPAV ILLLLPPDLL AASLPPAAPT AWWIWVLLLF VFSFFLGIVS 
VLAGVGGGVL FVPIVSSFFP FHLDFVRGAG LLVALSGALS AGPSLLRKGL ADLKLSLPLS
LIGSVSSIAG AIAGLMMSAD SVQLLLGIAI ISIAAIMMKA GKSGYPEVGE SDVIAKALGI
SGSYYEPTID ETVNWKVHRT PVGLVLFFFI GFIGGMFGMG AGWANVPVLN LLMGAPLKVA
VATSGLVLSM NGAAAAWIYL YKGAVLPLIA VPAVGGVMLG SKIGARMLTK VNTGSVRIVV
IVMMVIAGVR SIIKGMGL