| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0023 |
|---|
| Symbol | |
|---|
| ID | 6354937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 27581 |
|---|
| End bp | 29050 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642667647 |
|---|
| Product | glycyl-tRNA synthetase |
|---|
| Protein accession | YP_001942110 |
|---|
| Protein GI | 189345581 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATT CCGATCAAAC ACGGGTACAG AACGTGAGTC TGCCGCCCGA TAAAGTGATG
CATAAGCTGG TATCGCTGGC CAAGCGCCGC GGGTTCATTT TTCCGTCTTC GGAAATCTAC
GGAGGGCTCT CATCCTGCTT CGATTACGGT CCGCTCGGCA GCGAGATGAA AAAAAACATC
AAGGAGCTTT GGTGGAATTC GATGACCCGC CGCCACGCGA ATATCGTCGG CATCGATGCG
TCGATCATGA TGAACCCCAC CGTCTGGGAG GCTTCCGGCC ATGTGGCGAG TTTCAACGAT
CCCATGATCG ACGACCGCAC CACCAAACGG CGCTACCGTG CGGATCACCT GATCGAGAAC
CATATCGAAA AGCTGCGCCG CGACGGTAAA ACCGATCATG CGGAAGCGGT ACAGAGCGCC
TATGAAGCGG TAGCCGGCGC TCCTGACTCG AACAGGGCGC TTTATGATCT GATTACCGGC
GAGGCGATCA AGGCCCCGGA TACCGGATCG GGCGACTGGA CCGAAGTACG CCAGTTCAAC
CTGATGTTCC AGTGCAACAT GGGAGCTGTA GCCGACACGT CGGGCATTGT CTATCTGCGA
CCCGAAACCG CACAGGGTAT TTTCGTGAAT TTTCACAACG TGCGCGAAGC ATCGCGGATG
AAGGTGCCGT TCGGTATCGC CCAGATCGGC AAGGCGTTCC GAAACGAGAT CGTGAAAGGG
AACTTCATTT TCCGGATGGT GGAGTTCGAG CAGATGGAGA TGCAGTATTT CGTCAAACCC
GGCAGTCAGA TCGAGGCATT CGAAGCCTGG CGGGAGGAAC GCTTCAACTG GTACGTCACC
GAACTCGGAA TCACCCAAGA AAAACTTCAC TGGTACAAAC ACGACAAGCT TGCCCATTAT
GCCGATCTTG CTTACGATAT CAAGTTCGAA TTCCCGTTCG GCACAGAAGA GATCGAAGGC
ATCCATTCGC GAACCGATTT CGACCTGAGC CAGCACCAGC AGTACTCCGG CAAGAATATG
GAGTATATAG ACCAGACCAC CAACGAACGC TACATTCCCT ATGTGGTGGA AACCTCTTCG
GGATGCGACC GGCTCTTTCT CGCCCTGCTC TCGGACGCGT ACAACGAAGA TGTGGTGGAC
GGCGAACCCC GCGTGATGCT GAAGCTATCG CCTAAAGTAG CTCCGGTAAA GGCTGCCGTG
CTGCCGCTCG TCAAGAAAGG GGAGATGGGC GAAAAGGCCG AGCTGTTCCG TTCCGAACTC
TCAACGGCAT TCATGGTGCA GTATGACGAT GCTGCCTCGA TCGGCAAGCG GTACCGCCGC
CAGGATGAGA TAGGCACCCC GTTCTGCTTT ACAGTTGACC ATCAGACTCT CGAGGATCAG
ACCGTAACTG TACGATACCG CGACAGCGCT ACGCAGGAAC GGATAGATAT GTCGAGAGCG
AAAGAGTTTC TCGCAACTAA AATAGTGTAA
|
|---|
| Protein sequence | MNNSDQTRVQ NVSLPPDKVM HKLVSLAKRR GFIFPSSEIY GGLSSCFDYG PLGSEMKKNI
KELWWNSMTR RHANIVGIDA SIMMNPTVWE ASGHVASFND PMIDDRTTKR RYRADHLIEN
HIEKLRRDGK TDHAEAVQSA YEAVAGAPDS NRALYDLITG EAIKAPDTGS GDWTEVRQFN
LMFQCNMGAV ADTSGIVYLR PETAQGIFVN FHNVREASRM KVPFGIAQIG KAFRNEIVKG
NFIFRMVEFE QMEMQYFVKP GSQIEAFEAW REERFNWYVT ELGITQEKLH WYKHDKLAHY
ADLAYDIKFE FPFGTEEIEG IHSRTDFDLS QHQQYSGKNM EYIDQTTNER YIPYVVETSS
GCDRLFLALL SDAYNEDVVD GEPRVMLKLS PKVAPVKAAV LPLVKKGEMG EKAELFRSEL
STAFMVQYDD AASIGKRYRR QDEIGTPFCF TVDHQTLEDQ TVTVRYRDSA TQERIDMSRA
KEFLATKIV
|
|---|
| |