| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0019 |
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| Symbol | dapD |
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| ID | 6354933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 22958 |
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| End bp | 23821 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642667643 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001942106 |
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| Protein GI | 189345577 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCAT ACGAATCATT GCAACAGGAG ATACTTGCGC TGTCAACAGC CGGAGCTGCA
GAGCTTGCGG TAAATTCCGA TGCCCGGAGG ATTTTCGGAG AGTTCAAAAA ACTGCTCAAT
AACGGCATCG TCAGGGCCGC AGAAAAAAAA GACGGGGCAT GGGTAGTCAA TACATGGGTC
AAAGAGGGCA TTCTCATCGG TATGCGTCTC GGAAAACTGA CCGGTGTCAC GGTTGCTCCC
GAGGGATGTC TTGGCGCTTT TGTTTTTATC GATAAGGACA CCTGGCCTCT GAAAGAGATA
ACCCCTGAAC AGAACGTACG AATCGTTCCC GGCGGATCGT CCGTGAGGGA CGGCTCTTAC
CTTGCGCCTA CTGTTGTCAT GATGCCTCCG GCATATGTCA ACGTCGGAGC CTATGTCGAT
GCAGGAACCA TGATCGATTC ACATGCGCTT GTCGGCAGTT GCGCCCAGGT TGGCAGAAAT
GTGCATCTCT CGGCCGGAGT GCAGGTCGGC GGAGTGCTTG AGCCTGTCGG CGCTATGCCG
GTCATCATTG AAGACGATGT GATGGTCGGA GGCAACTGCG GTATCTATGA AGGTACGATT
GTACAGGAGC GTGCCGTCAT CGGTACGGGA GTTATTCTGA ACGGTTCGAC GCCGGTCTAT
GATCTGGTTA ATGGAACCAT TCATCGCAGG AACGCAGCAG GTCCGCTGGT AATTCCTTCC
GGAGCGGTTG TCGTTGCCGG CTCAAGAGCC CTCAAAGGCG ATTTTGCCGC TGAGAATGGT
CTTTCGCTTT ATACCCCGGT TATCGTCAAA TACAGGGATG AAAAAACCGA CAGCGCAACA
GCTCTCGAAC AGGCGCTGAG GTAG
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| Protein sequence | MSSYESLQQE ILALSTAGAA ELAVNSDARR IFGEFKKLLN NGIVRAAEKK DGAWVVNTWV
KEGILIGMRL GKLTGVTVAP EGCLGAFVFI DKDTWPLKEI TPEQNVRIVP GGSSVRDGSY
LAPTVVMMPP AYVNVGAYVD AGTMIDSHAL VGSCAQVGRN VHLSAGVQVG GVLEPVGAMP
VIIEDDVMVG GNCGIYEGTI VQERAVIGTG VILNGSTPVY DLVNGTIHRR NAAGPLVIPS
GAVVVAGSRA LKGDFAAENG LSLYTPVIVK YRDEKTDSAT ALEQALR
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