| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0018 |
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| Symbol | |
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| ID | 6354932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 21239 |
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| End bp | 22939 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642667642 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_001942105 |
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| Protein GI | 189345576 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA GTATGAACAA ACAACTCCTC ATGAACAAGA TCGGCGACGA GATTCAGGTC
GCGCTTGTTG AAGAGGGTCG GCTTGCGGAG CTGACCATCG AGCGGCCGGA AAGCCGCCGC
AGTATCGGCG ATATCTATCT TGGCAGGGTA CACAAGGTTG TTGAGGGTCT GAAGGCCGCA
TTTGTCGATA TAGGGCAGAA ATCGGACGGT TTTTTGCATT TCTCGGATGT AGGCACCACC
AACGAAGATT ATCGCGCGCT CATTGAAGAT GACGATGACG ATGAAAGCGT CAGCAGCGAT
GATGGAGATG GGGATGCGGT TGAAGTCGCG GCAACTGCCG GCGGCGGCGA TCCTCCTGCC
GCAGGGCCGC ATGCAAGAGG GCCGCAGCGC AACGGCGGCA GAAAAGGACC GGTTACCGAA
GAGGAAAAGG CGGAAAAGCG GCAATCCTAT ACGCAGATGA TAGCCGGCAA GCTTAAACCA
AACGACTCTA TTCTCGTTCA GGTTATCAAG GAGCCGATCA GCAGCAAAGG ATCCCGCCTG
ACATCCGACA TCACCATCGC AGGGAGGTTC ATGGTGCTGC TTCCTTTCGG AGGTGGACAG
GTTGCCGTTT CACGCAGGGT GGTTGTGCGC AAGGAACGGG CCCGTTTGAA AAAACTTGTG
CGATCCATGC TCCCGGAAGG TTTCGGAGCC ATTATCCGCA CCGTGGCCGA GCAGCAGGAA
GAGTCTCTGC TCAAGCAGGA TCTTGAGAAG CTTCTTACAA AATGGGTGCA GATCGAAGAA
AAACTCAAGG ACGCCTCTCC GCCTCAGCTG ATTTTCAAGG AGGATACCAT TATCTCCAGC
GTATTGCGCG ACTCACTCAC CTCCGACGTA ACGGAAATAG TTGCCAACTC ACCGGTAATC
TACAAGGAGA CCCTCAACTA TATCCAGTGG GCGGCTCCGG AAATGGAGAA GAACGTTTCT
CTTTACCAGG GAAAGCTTCC TCTTTTTGAA GGATACAGCA TAGCCAAGGA TGTCGAATCC
ATCTTTTCGC GCAAAGTGTG GCTGAAATCG GGCGGATATA TCATCATCGA GCACACCGAA
GCCATGGTGG TGGTTGACGT CAACAGCGGA CGCTATGCGG CCAAGCGCGA ACAGGAGGAA
AACTCTCTCA AAACCAATCT TGAAGCTGCA CGCGAGATTG TCCGTCAGCT CAGGCTGCGC
GACATAGGCG GCATTATCGT GGTGGACTTT ATCGATATGC TCGATCCGAA AAATGCCAAA
AAAGTGCATG ACGCCATGAA GACCGAGCTG CGCAACGACC GGGCGAAATC GAATATCCTG
CCAATGTCCG ATTTCGGCAT CATGCAGATC ACCCGTGAGC GTATCCGACC GAGTCTGATG
CAGCGCATGG GCGACCAGTG TCCCGCCTGC GGAGGCACCG GTGTGGTGCA GGCTCGTTTT
ACTACCATCA ACCAGATAGA GAGGTGGCTT CGCAAATATG CGCTGCAGCA GAGCATGAAG
TTTCAGCAGC TCGATCTCTA TGTCAGTCCT ACCGTAGCCG AACCGCTCAG GAATACCGAG
ATGAAAACCG AGCTGAAATG GTTTCTTCAG CATATGGTCT TTGTTCGCGT CAAGCAGGAC
GAAAGCCTTC GCAGCGACGA TTTCAGGTTT TACAACCGCA AAAACAATAA AGACATAACC
GCCGAATACG GCGAACTCTA A
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| Protein sequence | MKKSMNKQLL MNKIGDEIQV ALVEEGRLAE LTIERPESRR SIGDIYLGRV HKVVEGLKAA
FVDIGQKSDG FLHFSDVGTT NEDYRALIED DDDDESVSSD DGDGDAVEVA ATAGGGDPPA
AGPHARGPQR NGGRKGPVTE EEKAEKRQSY TQMIAGKLKP NDSILVQVIK EPISSKGSRL
TSDITIAGRF MVLLPFGGGQ VAVSRRVVVR KERARLKKLV RSMLPEGFGA IIRTVAEQQE
ESLLKQDLEK LLTKWVQIEE KLKDASPPQL IFKEDTIISS VLRDSLTSDV TEIVANSPVI
YKETLNYIQW AAPEMEKNVS LYQGKLPLFE GYSIAKDVES IFSRKVWLKS GGYIIIEHTE
AMVVVDVNSG RYAAKREQEE NSLKTNLEAA REIVRQLRLR DIGGIIVVDF IDMLDPKNAK
KVHDAMKTEL RNDRAKSNIL PMSDFGIMQI TRERIRPSLM QRMGDQCPAC GGTGVVQARF
TTINQIERWL RKYALQQSMK FQQLDLYVSP TVAEPLRNTE MKTELKWFLQ HMVFVRVKQD
ESLRSDDFRF YNRKNNKDIT AEYGEL
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