Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0017 |
Symbol | rnhB |
ID | 6354931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 20113 |
End bp | 21012 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642667641 |
Product | ribonuclease HII |
Protein accession | YP_001942104 |
Protein GI | 189345575 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.851734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGACT GTCCTGCCGC TGTATCTGAT TGGTTGTATT CTCCAGGGAG TACCGGCAGA GTCGTTCAAT CCGGAGTGCA GAAGCCCCGT TACAAGCAGC AGCATGAGGC AGGATTACAG GATTACAGGC CAACTAATAA GATAAGAAAT TATACCGGGA AACAGCAATA CGAGGGCAGG TTGGACCTAC GATCACCAGT ATACCATTTT GCTGCGGATT ACGCTATATT ACGGGATAAT ACCGCAACCC GTCTTACCGA AACTGAGGCA CAGAGAAACC CCATGAACAC CGATTACGAA TATCCTTTCT GGCGAAACAC CGAACTGCTC TGCGGCATTG ACGAAGCTGG CAGAGGGCCG CTGGCCGGAC CGGTTGTCGC TGCGGCCGTG GTGTTCCCCC GCTGGTTCAC CCCGGAAACA GACCGCCTTT CCCTGCTTAA CGACTCCAAA AAGCTTTCTC CCGGACTTCG CACGGAGCTT GCATCTTCCA TTAAAGCCGC TGCACTGCAC TGGGCGACAG CCTTGATCGA GCCCGAAACA ATCGACCGGA TAAACATTTT TCATGCAACC ATGCTGGCCA TGAACAATGC CGTCACGTCG CTTTCTGAGA CTCCCGAACT GCTGCTTGTC GACGGCAACC GTTTCAGACC GTTGCTGCCG ATTCCTTATG AAACCATAGT AAAAGGCGAT GCAAAAGTAT TTTCCATCGC CGCCGCATCC GTACTCGCCA AAACCTGTCG GGATACTATC ATGAAAGAGT ATGCCCTGCT CTATCCACAG TACGGTTTCG AGCATCATTT CGGGTACCCA ACCGGAGAGC ACATCCGGGC GGTGGCACAA TACGGCAGAA GCCCCATTCA TCGCAAAAGC TTCAAACTGA AACAACTCGG GGAAAAGTAG
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Protein sequence | MPDCPAAVSD WLYSPGSTGR VVQSGVQKPR YKQQHEAGLQ DYRPTNKIRN YTGKQQYEGR LDLRSPVYHF AADYAILRDN TATRLTETEA QRNPMNTDYE YPFWRNTELL CGIDEAGRGP LAGPVVAAAV VFPRWFTPET DRLSLLNDSK KLSPGLRTEL ASSIKAAALH WATALIEPET IDRINIFHAT MLAMNNAVTS LSETPELLLV DGNRFRPLLP IPYETIVKGD AKVFSIAAAS VLAKTCRDTI MKEYALLYPQ YGFEHHFGYP TGEHIRAVAQ YGRSPIHRKS FKLKQLGEK
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