| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0013 |
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| Symbol | secF |
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| ID | 6354927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 15393 |
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| End bp | 16328 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642667637 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001942100 |
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| Protein GI | 189345571 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000001158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGATTT TTCATAAAAC CAGCTTTAAT TTTATCAAGC ACCGTAAAAT AGCCTACGTT
ATTTCCATGG TGCTTCTGTT GTCAGGTATT GTCTCCCTTG CCTTCAGGGG GCTTAATTAC
GGGATAGATT TCAGGGGCGG TTCCGAGGTG GTGATACGCT TCGAAAAAAA CGTGGAAGTC
GGCAGCGTAA GAGCTGTACT CAAGGAGGCC GGAGTTTCCG GAACCCTGAA GCAGTACGGC
ATCGACCGTT CGTTTCTGCT CAGTACGGTG TTCAGCGGTC AGACCAATGA ACTGAAAGCG
CTTGTTTCCA ACGCTTTCAA TGCACGCTTT CCTGATAATC GCCATGAAAT CGTGCGTATT
GATTCCGTCG GGCCGAGCAT CGCTTCAGAC CTGAAATGGT CGGCGCTCAA GGCATTACTC
GGCGCCCTTG CGGCAATTCT GCTCTATGTG GGTATCCGGT TCGAGCTTAA ATTCGCCGCT
GCCGGCGTTG TCGCCATTTT TCACGATGTG CTTACGGTGC TCGGTCTGTT CAGCATTCTC
GGGGGACTTT TCGCATTCAT GCCGCTCGAG ATGGATCAGA GCATCATTGC GGCATTTCTC
ACCGTTGCCG GATACTCCAT TACCGATACC GTCGTGGTGT ACGACCGGAT AAGGGAGAGG
ATCCGCGGAC GGAAGCCGTC TGAATACGAA GCCATATTCA ATGACAGCAT GAACCAGACG
CTCAGCCGTA CCATCATTAC CTCAGGAACG ACACTCATCA CCGTGCTGAT TCTTTTCATT
TTCGCGGGTC CGGCAATCAG AGGATTTGCT TTTGCCGTTT TCACAGGAAT TCTTATCGGA
ACCTACTCGT CTATTTTTGT TGCCGCCCCT ATCGTTTATG ACTGGCTGAA GGCGACAAAG
TCCTCGGTAA GGCTCAGAGG GGGCAGTGTT TCGTAA
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| Protein sequence | MRIFHKTSFN FIKHRKIAYV ISMVLLLSGI VSLAFRGLNY GIDFRGGSEV VIRFEKNVEV
GSVRAVLKEA GVSGTLKQYG IDRSFLLSTV FSGQTNELKA LVSNAFNARF PDNRHEIVRI
DSVGPSIASD LKWSALKALL GALAAILLYV GIRFELKFAA AGVVAIFHDV LTVLGLFSIL
GGLFAFMPLE MDQSIIAAFL TVAGYSITDT VVVYDRIRER IRGRKPSEYE AIFNDSMNQT
LSRTIITSGT TLITVLILFI FAGPAIRGFA FAVFTGILIG TYSSIFVAAP IVYDWLKATK
SSVRLRGGSV S
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