| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1745 |
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| Symbol | |
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| ID | 6332689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1801957 |
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| End bp | 1803177 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642658020 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001931896 |
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| Protein GI | 188997645 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGAAT TTCAATTTGA CGCAAGAGAC AAATACGGAA TAAGAAAAAC CGGAGTTATA
GAAGCTAATT CAACAGAAGA GGCAGAAGAA ATCTTAAAAA AACAAGGTTT TAGTAGTGTT
AGCATAAAGA CTAAATCTTT AAAAGAAAAG CAAAAATTAA AAGGTAAAAG TACAACCATC
CTTAAAAAGA AAGTAAAAGA AGAAGATTTG GCTATATTCG CAAGGCAGCT TGGAGCAATG
ATTGGTGCAG GTATTGGTAT AGCTCAAGCT TTAGAAATAC TCTCGGAGCA GATGCCAAAT
CCAACTTTAA AGGAAGCATT AATAAATGTA AAAGACGATG TTATTACAGG AATGTCTTTG
TCAAAATCTA TGCAAAAGCA CCCAAAAGTA TTTCCACCGT TTTTAATAAA CCTAATTGCT
GCAGCAGAAG AATCTGGTAA GCTTGATGAA ATCTTAAAAA GAGCAACTAT TTACTATGAA
AAGTTGGCTG CAATAAGAAG AAAGATAATA AGTGCATCTT GGTATCCAGC AGCAGTAGTA
ATAATAGCAA CAGTAATTGT CTTAGGACTA CTAACTTTTG TAGTTCCAAC TTTTGCAGAG
ATATATGCAA GCTTTGGTGG AGAATTGCCA CTTTTAACCC AAATTTTGAT AAATATAAGT
AATAGTCTTA AAGAAAATAT TCTGTATGTA ATAGGTTTTT TTGTCATTTT CGTAATTATG
AATAGACTAA TTTACAAAAC ATATAATGGG AAGAAATTCT ATCATAAATT ATTTTTAAAA
ATTCCATTAA TTGGAAAAAT ACTTCACAAA GGAGCTTTAG CTAAATTTGC AAGAACATTC
GCAACACTTA TAAATGGTGG CGTTCCTATT TTAAGGTCGG TTGAAATAGC CTCTACTACT
GTTGGTAATG TATTAATTGA AGAATCTTTA CAAAAAACCA AAGATGAAAT AGAAAAAGGT
AAACCTATTG CTGGATCTCT TGACAAAAAA TACTTTCCAC CTATGTTTAT AGCTATGGCG
GCAGTAGGTG AAAACACAGG TAGATTAGAT GAGATGCTTG ATACAATAGC CAATTTTTAC
GAAGACGAAG TAGATAGAGA AGTTGATGCG CTTATTTCTA CTTTAGAGCC TTTACTGATG
GTATTCATTG GTGGAATTGT TGGATTTATT TTAATCGCAT TATACTTACC AATCTTCAAA
ATGGGTGAAC TCATTAAATA A
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| Protein sequence | MGEFQFDARD KYGIRKTGVI EANSTEEAEE ILKKQGFSSV SIKTKSLKEK QKLKGKSTTI
LKKKVKEEDL AIFARQLGAM IGAGIGIAQA LEILSEQMPN PTLKEALINV KDDVITGMSL
SKSMQKHPKV FPPFLINLIA AAEESGKLDE ILKRATIYYE KLAAIRRKII SASWYPAAVV
IIATVIVLGL LTFVVPTFAE IYASFGGELP LLTQILINIS NSLKENILYV IGFFVIFVIM
NRLIYKTYNG KKFYHKLFLK IPLIGKILHK GALAKFARTF ATLINGGVPI LRSVEIASTT
VGNVLIEESL QKTKDEIEKG KPIAGSLDKK YFPPMFIAMA AVGENTGRLD EMLDTIANFY
EDEVDREVDA LISTLEPLLM VFIGGIVGFI LIALYLPIFK MGELIK
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