| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1744 |
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| Symbol | |
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| ID | 6332688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1800869 |
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| End bp | 1801957 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642658019 |
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| Product | twitching motility protein |
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| Protein accession | YP_001931895 |
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| Protein GI | 188997644 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAA TTAAATCTTT TAGAATTGAT GAAATAGCAA GAGAAGCTGT TGATAGAAAT
GCCACCGACA TACATATTAC GGCAGGAGTT CCACCTATAA TAAGGGTAGA TGGTAGATTG
ATTCCATTAA TCGGATATCC ACCAATGACA CCAAAGGATA CTCAAGAATT TATATATTCA
TTTATGAATG AAAAACAGAA GAAGACTTTT GAAGAAAAGA AAGAACTTGA TTTTTCTTTT
GGAATAAAAG GCATTGGAAG GTTTAGGGTA AATGTATTTT ATCAAAGAGG CACAGTGGCA
GCTGCACTGA GAAGAATTCC ATATGAAATT AAACCAATGG AAGAATTAGG TTTAATACCT
AAGGTTAGAG ACTTGTGTCA TCTTTCTATG GGACTAGTTC TTGTTACTGG TCCAACTGGT
TCAGGTAAAA CTACAACCTT AGCATCCATG ATAGATTATA TAAACGCAAA CTTTCCTCAC
CATATAATAA CTATCGAGGA CCCTATAGAA TATATATACC AACATAAAAA ATCCGTCATA
GCACAAAGAG AATTAGGAAC TGATACAGAT TCTTTTGCTC TTGCATTAAA ATATGCTTTA
AGGGAAGACC CGGACGTTAT ACTTGTCGGT GAAATGAGAG ATTTAGAAAC TATAAGGGCA
GCATTGACTG CAGCAGAAAC TGGTCACTTA GTATTTGGAA CATTACATAC AAACACGGCT
GTTCAAACTA TCAACAGAAT AATAAACGTA TTCCCTATGG AAGAACAAGA TCAAGTAAGA
ACAGAATTAA GCTTTGTTCT TCAAGGTGTT ATATCTCAAA GACTTTTACC TAAAATTGGT
GGTGGAAGAG TTCTTATTCA TGAAGTCATG ATTCCAAATA TTGCAATAAG AAACTTGATT
AGAGAAAATA AAGTTCATCA AATTTATGGT CTAATGCAAA CAGGTCAGGC AGAGAGTGGT
ATGCAAACAA TGAATCAATC AATAATAAAA GCATTGCAAA GAAAGCTAAT AACCGTCGAG
GATGCATTTA GAATTTCTCC AGATCCTGAA GAATTAAAAA GAATGATATC AACTTTTGGA
GTTAAGTGA
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| Protein sequence | MEEIKSFRID EIAREAVDRN ATDIHITAGV PPIIRVDGRL IPLIGYPPMT PKDTQEFIYS
FMNEKQKKTF EEKKELDFSF GIKGIGRFRV NVFYQRGTVA AALRRIPYEI KPMEELGLIP
KVRDLCHLSM GLVLVTGPTG SGKTTTLASM IDYINANFPH HIITIEDPIE YIYQHKKSVI
AQRELGTDTD SFALALKYAL REDPDVILVG EMRDLETIRA ALTAAETGHL VFGTLHTNTA
VQTINRIINV FPMEEQDQVR TELSFVLQGV ISQRLLPKIG GGRVLIHEVM IPNIAIRNLI
RENKVHQIYG LMQTGQAESG MQTMNQSIIK ALQRKLITVE DAFRISPDPE ELKRMISTFG
VK
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