| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1721 |
|---|
| Symbol | |
|---|
| ID | 6331468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 1782163 |
|---|
| End bp | 1783227 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642657995 |
|---|
| Product | ribosomal RNA large subunit methyltransferase N |
|---|
| Protein accession | YP_001931872 |
|---|
| Protein GI | 188997621 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
|---|
| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.428537 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTA ATTTAAAAAA TTTTAATTTA AAAGAGCTTG AAAATTTTGT AGTAGAAAAA
GGCTGGCAAA AGTTTAGAGC TAAGCAAATA GCAAAATGGC TGTATAAGAA AAAAGTCAGC
TCTTACGACG AAATGACTGA TTTATCAAAA GATATAAGAA ATTACTTGAA AGAAAATACA
GAATTTAACG CTTTAGAATT AGTTATGTAC CAGCAATCAA AAATAGATGG AAGTATAAAA
TTTTTATGGA AGCTTAAGGA TGGAAACACA ATAGAAACCG TTTTGATAAA CGAAAAAAAC
CATAAAACTT TGTGCGTGTC AACGCAAGTT GGTTGTGCCG TAGGTTGTAA ATTCTGCTTT
ACTACAAAAG ATGGACTTAT TAGAAATTTA GAAACAGCGG AAATCGTTGA GCAGTATATT
AACGTCCAAA GATTTTTAGG AATGGAGGAA GAAAATAGAA TATCAAACAT AGTTTACATG
GGAATGGGTG AGCCTTTGGC AAACTATGAA AATGTAAAAA AGTCTGTTCA AATCTTTACT
CATCCTGATA TGGTAGGATT ATCCCATAGA AAAATCACAA TCTCTTCAAG TGGAATACTT
CATCAGATAA AAAGAATGTA CGAAGATAAA GAATTCCCAG AAGTCAAACT TGCAGTATCA
TTAAACGCAT CAAATCAAGA TCAAAGAGCA TTTTTAATGC CAATATCACA AACAAACACA
CTTCAAGACC TTATGGATTT ATTAAGAAGC ATACCACTTA AACCAGGTTG GAGAATAACG
CTTGAATATG TTTTAATGAA AGGAGTAAAC GATTCAGAGC AAGACGCTAA AAGACTTGTA
AATCTTTTAA AGAAAGACAA ACACAGATTT AAAGTAAATC TAATACCATT TAATCCATAT
CCTTCAGCAG AATTTGAAAG ACCGGAGGAA GAAAGAGTTT TAAAGTTTGA AAAAATTCTT
TGGGATAACA ACATTGCTAC ATTTATTAGA TGGAGTAAAG GAAGAGATAT AGATGCTGCA
TGCGGACAAC TAAGGAAAAA AGCGGTAGAT CTGATAAATG TTTGA
|
|---|
| Protein sequence | MKVNLKNFNL KELENFVVEK GWQKFRAKQI AKWLYKKKVS SYDEMTDLSK DIRNYLKENT
EFNALELVMY QQSKIDGSIK FLWKLKDGNT IETVLINEKN HKTLCVSTQV GCAVGCKFCF
TTKDGLIRNL ETAEIVEQYI NVQRFLGMEE ENRISNIVYM GMGEPLANYE NVKKSVQIFT
HPDMVGLSHR KITISSSGIL HQIKRMYEDK EFPEVKLAVS LNASNQDQRA FLMPISQTNT
LQDLMDLLRS IPLKPGWRIT LEYVLMKGVN DSEQDAKRLV NLLKKDKHRF KVNLIPFNPY
PSAEFERPEE ERVLKFEKIL WDNNIATFIR WSKGRDIDAA CGQLRKKAVD LINV
|
|---|
| |