| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1715 |
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| Symbol | lpxC |
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| ID | 6331439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1776163 |
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| End bp | 1777056 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657990 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001931867 |
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| Protein GI | 188997616 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000475768 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTGTC AATTTCAAAG AACAATAAAA AAACCAATAA TCATTGAGGG AATAGGCTTA
CACTCAGGAG ATAATGTTAA AATAAAACTT TTTCCTGCAA ATAAAAATGA AGGAATAAAC
TTTATTAAAA ATAATGTAGT TATACCTGCA AAGATAGATT ATGCTCATAG CTTTGAATAT
TCAACAACTT TATACAAAGA CGGCGTTTCA GTTAGGACAA TAGAGCATTT AATGGCAGCA
CTTTATTTTA CCGGAATTGA TAATGTTTAT ATTGAGTTAA TAGGCGAGGA GTTGCCAATC
CTTGATGGAA GCAGCAAAGG TTTTGTTGAA AGGATAAAAG AAGCCGGAAT TAAAACACTT
AACGAAGAAA AATTGTATGC AGTTTTAGAA GAACCTGTAA AGGTTGAAAT AGAAGATAAA
TTTATTATGG CAAAGCCATC AAATGAAATA AAAATTACAT ATCAAGCAAA CTATAATAAT
GATATTATCG GAAATAAAAG CTTTACATAC ATACCTTATG AAAAAGAGTC TTATGAAGGT
GTTTATACAG CAAGAACTTA TTGCTTTTTA GAAGAAGTAG AGTACTTAAA GAAGAACGGT
CTTGCCAAAG GCGGGTCTCT TGAAAATGCT GTTGTTTTTC ATAACAATCA GGTAATAAAC
GAAGAGGGTT TAAGATTTGA AGACGAGCCT GTAAGACATA AAGTATTGGA TTTAATCGGT
GATTTGTATC TGCTTGGCTA TCCTTTGGTT GCAGAAGTTT ACTCTTTTAA AGGCGGACAC
AGATTAAATG CTATGTTTGT AAAAACATTG GTAGAAAACT CACTTTTTAC AATTAAACCA
GCATCAGAAG TTTTAAATTT TATTCCAAAT TATAAAGAGG CTTTGGTAGG TTAA
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| Protein sequence | MICQFQRTIK KPIIIEGIGL HSGDNVKIKL FPANKNEGIN FIKNNVVIPA KIDYAHSFEY
STTLYKDGVS VRTIEHLMAA LYFTGIDNVY IELIGEELPI LDGSSKGFVE RIKEAGIKTL
NEEKLYAVLE EPVKVEIEDK FIMAKPSNEI KITYQANYNN DIIGNKSFTY IPYEKESYEG
VYTARTYCFL EEVEYLKKNG LAKGGSLENA VVFHNNQVIN EEGLRFEDEP VRHKVLDLIG
DLYLLGYPLV AEVYSFKGGH RLNAMFVKTL VENSLFTIKP ASEVLNFIPN YKEALVG
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