| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1683 |
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| Symbol | |
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| ID | 6331903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1745361 |
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| End bp | 1747772 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657958 |
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| Product | phenylalanyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_001931835 |
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| Protein GI | 188997584 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 66 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCC CTTACTCGTG GATAAAAGAG TTTATAGATA TAGACATTCC AGTCTCAGAT
GTAGTAGTAA AGCTAAACAC TACAGGCATT GAAGCAACTT TTTATAAATT TGGGCAGTAT
ATTCCAAATC TAACGACTGT AAAAGTTTTA TCAGTCATAA AACATCCAGA AAAAGATAAG
CTTTATATCT GTAAGGTTAG CGATGGCAGT AGAGAATATC AAATCATAAC CGGTGCTGAT
AATGTAAAAG AAAATGATGT TGTAATTCTT GCAAAGGTTG GAGCTTTAAT AAAAGGAAGA
GAAATAAAGG CAGTATCTTT TGGTTCTTAT ACTTCAGAAG GAATGCTTCT ATCATTGGAA
GAGCTTGAGG TAGAAGAAAA ATCAGAAGGT ATTTTTATAT TAGACGAAAA CACGCCGGTA
GGAGCAGACC CAAATAAGAT TCTTGGTCTT GGAGAAGACT ATATCTTAGA GATAGAAATT
ACGCCAAACA GAGGTGATGC GTTAAGTGTT AGAGGGCTTG CAAGAGAGAT TGGAGCTATT
TTTAATCTAA AAAGAAAAGA AATTCAGCCA AAGCCTGTTT TAACAGACAA AGAAACAGCT
ATCAATATTG AAACAGACAA AGTTTACAGA TACATTGGAA CAATTATAAA AAATGTAAAA
ATTAAAAACT CACCTCTTGA TGTTAGATTA AAACTTATCA AATCCGGTAT ATCTGTAATA
AACAACATCG TTGATATTAC TAACTATGTA TTACTTCAAG AAGGGCAGCC ACTGCATGCT
TTTGACCTTG ATAAGCTTGA AGGTGGTATA ACAGTCAGGT ATGCGAAAGA GGGTGAAAAA
ATAATCACCT TGGACGGTCA AGAAAAAGAG TTAAAACCTA CCGATGTAGT AATAGCTGAC
AGTAAAAAAG CCTTAGCTAT AGCCGGCGTT ATTGGTGGAG AAAACTCCAA GATTGATGAA
AATACTAAAA ACATCTTGCT TGAGGCAGCA GTTTTTGACC CGGCAAGCGT TAGAAAAACA
TCAAAAAGAC TTGGAATTTT AACAGATTCT TCTTACAGAT TTGAAAGAGG TGTAGATGTA
GAGCATACAT CTAAAGCATC AAACTTTGCT ACCCAGTTGA TTTTAAACTT AGCCGGCGGA
GAAGTTGAAG CTTATAAAGA TGTCTACGTT AAACCTTACA CACCAAAGAC GGTAGTATTA
AAGCCGGAGT TTGTAGAAAA AGTTCTTGGT GAAAAAATCA AGGCGTCAGA GATTAAATCT
ACTTTAGAAA GATTAGAAAT ACCTACCCAA ATTCAAGAAA ATCAGATCAA CGCTGAAATT
CCACCCTTTA GAGCTTATGA CTTAGAAAGA CCGATCGATT TAATTGAAGA AGTAGCAAGA
ATTTATGGTT ATGACAACTT TACACCAACC TATCCAAGAG TTCCGGTTGA AGCGTATGAA
AAATCTTTAT ACTATGACTT TGATAACAAA GTAAGAACTT ACTTTTTAGA TAATGGATTT
ACAGAAGTTT TAAACTACAC TTTCACATCA GAAGAAATCT ATAATGCTTT AAAACTTCCT
ATTCCTGAGA TTAAAATAAC TAACTATATC TTAAAATCCC ACAGCATTTT AAGAGATAGG
ATTGTAGTTA GCCTGCTTGA AAACCTAAAA GAAAACTTAA GATTTGGAAG AAAAGATTTA
TCTATTTTTG AGCTTTCATC TACATTCTTT AAGGATTTTG AAGAGATAAG AGTAGGATGT
TTAGCAGTTG GAAAGCTTGT TGAGGGGTTT AACTACACAG AAAAAGAAAG AAGATTTAGC
ACAACTCACA GTTGGAACTT TTTAAAGCTA AAAGGTGTAG TAGAAAATCT GCTTAATAAG
CTTGGAATCA AAAACTATCA GCTTACAGAT GAAAATATAG AAGTATTTTT ACATCCATAT
GGATCTGCAA ACATACAGGT CAACGGCTAT GACATAGGAT TTATTGGAAA AATCCATCCT
GAGATAGCAC ATAAGCTTGA AATACCAAAA GACACTTACG TAGCAGAGTT AAAATTAAGA
CATGTTCCAA GAGAGATTGA AAAGGAAAGC TTGTTAGATG GATATCTTTT CACATACTAT
CTTAAAAAAG AGCCGGTAGT ATTCCAAGAA CTGCCAAAAT TCCCATCAGC TTATAGAGAC
CTTGCCTTTG TAATTGATGA AAGTGTAAAG GTTGGCAAAC TTAAAGAAGA TATATTAAAA
GCTTCTAAAT ACGTAAAAGA AGTTAAACTT TTTGATGTAT ATTTCTTATC TGAAAATAAA
AAAAGCGTTG CCTTTAACGT TGAGTTTTTC AATCCAGAGA AAAGCTTGTC TGACGAAGAG
GTCAATATCA TAGTTGAAGA AATTTTAAAT AAACTTAAAT TAAATTATCC TGATATTAGT
TTAAGAACTT AG
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| Protein sequence | MKVPYSWIKE FIDIDIPVSD VVVKLNTTGI EATFYKFGQY IPNLTTVKVL SVIKHPEKDK
LYICKVSDGS REYQIITGAD NVKENDVVIL AKVGALIKGR EIKAVSFGSY TSEGMLLSLE
ELEVEEKSEG IFILDENTPV GADPNKILGL GEDYILEIEI TPNRGDALSV RGLAREIGAI
FNLKRKEIQP KPVLTDKETA INIETDKVYR YIGTIIKNVK IKNSPLDVRL KLIKSGISVI
NNIVDITNYV LLQEGQPLHA FDLDKLEGGI TVRYAKEGEK IITLDGQEKE LKPTDVVIAD
SKKALAIAGV IGGENSKIDE NTKNILLEAA VFDPASVRKT SKRLGILTDS SYRFERGVDV
EHTSKASNFA TQLILNLAGG EVEAYKDVYV KPYTPKTVVL KPEFVEKVLG EKIKASEIKS
TLERLEIPTQ IQENQINAEI PPFRAYDLER PIDLIEEVAR IYGYDNFTPT YPRVPVEAYE
KSLYYDFDNK VRTYFLDNGF TEVLNYTFTS EEIYNALKLP IPEIKITNYI LKSHSILRDR
IVVSLLENLK ENLRFGRKDL SIFELSSTFF KDFEEIRVGC LAVGKLVEGF NYTEKERRFS
TTHSWNFLKL KGVVENLLNK LGIKNYQLTD ENIEVFLHPY GSANIQVNGY DIGFIGKIHP
EIAHKLEIPK DTYVAELKLR HVPREIEKES LLDGYLFTYY LKKEPVVFQE LPKFPSAYRD
LAFVIDESVK VGKLKEDILK ASKYVKEVKL FDVYFLSENK KSVAFNVEFF NPEKSLSDEE
VNIIVEEILN KLKLNYPDIS LRT
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