| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1681 |
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| Symbol | |
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| ID | 6331090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1742829 |
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| End bp | 1744523 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642657956 |
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| Product | phosphodiesterase |
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| Protein accession | YP_001931833 |
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| Protein GI | 188997582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAA TATTAGTTGG TTTATCTTCT GCAATTTTGG CAGGCGGAGC CGGATTTTAT
GCAAGCAAAA TAACAATTGA GAAAAAACTA AAAGAAAAAG AAGAAGAGTA CAAAAAAGTA
TTAGAAAGAA AAGAAGAGAT TGAAAAACAA GCAATAACTG AAGCTGAAAG AATCAAAAAA
GAAGCTGAAA GAGAAGCTGA AAGAATTTTA AAAGAGATTG AGAAAGAAGC TAAGCTAAAA
GCCTCAGAAA TAGAAAGGGA GGCTTTAAAG CTTAAAGAAC AACAAGAATT CATTATAGAA
AAAGAACTTT TAAAGAGAAA GCAAGAGCTT GAAAATGAGC TTAAACAAAA GAGAGAAGAG
CTTCAAAACT TGGAAAAACA GCTTTTGATG AGAGAGTCCC AGTTAGAAAA GAGACTTGCA
AGAATTGAAC ATAAAGAAGA GGAAATAACA AAAAGAGAGC AAGAAATACA CAAATTAGAA
GAAGAGATTA GAGCTTTAGA AAATATTTTA AAAGAAAGAG AAGAAAAGCT AAAAAATGCA
GAACAGCAAT ACATTCTTGA ACTTCAAAGA ATAGCAAGCA TGACAAAAGA TGAAGCAAAA
GCAGAGCTTA TGAAGAAAGT TGAAGAAGAG GCTAAACTTG AAGCTGCTAA ATTAATGAGA
GAGATAGAAG AAGAGGCAAG AAAACAGGCA GAAAAAGAAG CTAAATGGAA CCTTGTGACG
GCAATACAAA GATTAGCACC AGAAGTAACA ACATCTTATA CTGTCTCGGT AGTTGACCTT
CCAAGCAATG ACATAAAAGG AAGAATCATC GGAAGAGAAG GAAGAAATAT AAGAGCTTTT
GAGCTTGCAA CAGGCGTTGA CTTAATCATT GATGATACAC CAGATATAGT AACAATATCA
TCCTTTGACC CATTAAGAAG AGAGATAGCA AAAACAGCTT TAGAAAGACT TATAGCAGAT
GGAAGAATCC ACCCAGGAAG AATTGAAGAA GTTGTTGAAA AAGTGAAAGA AGAAATGGAT
CAGCATATAA GAAAGCTTGG AGAAGAAACA TGTTTAGAAC TTGGATTTAC TGACGTCCAT
CCTGAACTTT TCTACTACAT TGGAAAATTA AACTACAGAA CATCTTATAC ACAAAACGTA
CTGCTTCATA CAAAAGAGGT TGCATACTTA GCAGGTATGA TGGCTGCAAT GCTTGGACTT
GATGAAAAGA AAGCAAGAAG GGGCGGACTT ATGCATGATA TAGGAAAAGC AATATCTCAT
GAAGTTGGAG GTGCCCACTC TAAGGTTGGT GCTGAGATTG CAAAAAGATA TGGAGAGCCA
GATTATGCAA TAAATGCTAT CCTTTACCAC CATGGAGACG AGCCAGCAAG ATACCCGGAA
GCTGTATTAG TTGCTGCTGC TGACGCACTT TCTGCTGCAA GACCAGGAGC AAGAAGAGAA
GTATTACAAT CTTACATAAA TAGACTTGAA AAAATAGAGG CTATAGTCAA CTCATTTGAA
AATGTAGAAA AATCTTTTGC AATTCAAGCA GGTAGAGAAG TTAGAGTTAT CGTCAATGCA
GAAAAATTAT CCGATGAAGA AGCATACTTA CTTACAAAAG AAATTGCTAA AAGAATAGAG
AATGAGCTTG ATTTTCCAGG ACAGATAAAA GTCGTAACAA TCAGGGAATC AAGATTTGTC
GAAGTGGCAA AGTAA
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| Protein sequence | MTEILVGLSS AILAGGAGFY ASKITIEKKL KEKEEEYKKV LERKEEIEKQ AITEAERIKK
EAEREAERIL KEIEKEAKLK ASEIEREALK LKEQQEFIIE KELLKRKQEL ENELKQKREE
LQNLEKQLLM RESQLEKRLA RIEHKEEEIT KREQEIHKLE EEIRALENIL KEREEKLKNA
EQQYILELQR IASMTKDEAK AELMKKVEEE AKLEAAKLMR EIEEEARKQA EKEAKWNLVT
AIQRLAPEVT TSYTVSVVDL PSNDIKGRII GREGRNIRAF ELATGVDLII DDTPDIVTIS
SFDPLRREIA KTALERLIAD GRIHPGRIEE VVEKVKEEMD QHIRKLGEET CLELGFTDVH
PELFYYIGKL NYRTSYTQNV LLHTKEVAYL AGMMAAMLGL DEKKARRGGL MHDIGKAISH
EVGGAHSKVG AEIAKRYGEP DYAINAILYH HGDEPARYPE AVLVAAADAL SAARPGARRE
VLQSYINRLE KIEAIVNSFE NVEKSFAIQA GREVRVIVNA EKLSDEEAYL LTKEIAKRIE
NELDFPGQIK VVTIRESRFV EVAK
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