Gene SYO3AOP1_1678 details

Gene Information

• Locus tag: SYO3AOP1_1678
• ID: 6331087
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurihydrogenibium sp. YO3AOP1
• Kingdom: Bacteria
• Replicon accession: NC_010730
• Strand: +
• Start bp: 1740821
• End bp: 1741435
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 642657953
• Product: Fimbrial assembly family protein
• Protein accession: YP_001931830
• Protein GI: 188997579

Plasmid Coverage information

• Num covering plasmid clones: 78
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAAAA TAAACCTAAA TCCAGGAAAG AAAAAAAGAG GATCGGCTGT AGCCATACCA 
TCTATTAGTC TAAAATACTT AAAATTGGAA AATGTAAATA AATTTCTCGT AATCTTACTA 
CCGGTTATTT TAATAGTGAG TTTATTATTT TATTACTTTT ACTTAGAATT GCAAATTAAT 
AGCCTGTATC AAAGAAAAAC AGAACTTGTC GCAGAAAAAG AAAAATTAAA GGCTATAGAA 
AACAAAATAA ACCAACTAAA AAAAGCAATA GCCGAGCAAG AGAAACAAAA AGATAAGTTA 
GAGTTAAGAT TTAAAACTTT TCAATATTTA GCAGATTCAA GAAAATCTTT AACACCAAAA 
TTGAATAGTG TTGTTTTACC AATACCTGAT GGATTATGGC TTGAATCTGT TGAAATATCA 
AAAGACTCCG GAAAAATTAC TGGAAATTCT CTCAAGCCAG AACTTATAGC AAGATACTAT 
AAATCTCTTA GCAGTTCTTA TAAAGATATC GTCTTTAATG CAACAGAGAA GAAAACGTCA 
CCAGCAAATA TTATTTTCTA TAATTTTACA CTCGAACTTA AAAATCAAAC TGCAGAAAAA 
AGAGAGGGAG TATAA 

 

Protein sequence

MIKINLNPGK KKRGSAVAIP SISLKYLKLE NVNKFLVILL PVILIVSLLF YYFYLELQIN 
SLYQRKTELV AEKEKLKAIE NKINQLKKAI AEQEKQKDKL ELRFKTFQYL ADSRKSLTPK 
LNSVVLPIPD GLWLESVEIS KDSGKITGNS LKPELIARYY KSLSSSYKDI VFNATEKKTS 
PANIIFYNFT LELKNQTAEK REGV