| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1670 |
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| Symbol | |
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| ID | 6331860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1730254 |
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| End bp | 1733583 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642657945 |
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| Product | helicase domain protein |
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| Protein accession | YP_001931822 |
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| Protein GI | 188997571 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 86 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCACAT TTATAACCAA TCATGGAAAC AAAGACCTTA AAAGAAGACT GCAGGAACTT
ATAGAAATCA GCAGAGAGCT AAAATTTCTC GTTGGGTTCT TTTATTTCTC AGGAATAAAA
GAATTCTATG AAACTTTAAA AAATCTCTAC GACGAAGGCA AGCTTTCACA GGAGCATATA
AAAATCTTAG TTGGATTAAG TGTAGACAAA GACAACTATG GACTCTATGA AGTAGCAACA
AAGCTTAAAA GTAAAGACGA GTATTTTCAA GCTTTAATAA ACTCTGTAAA GATAGCTTTT
ACAAGCCAAG AGCTAGATAA TGAAGATATA CACGAGCAAG TTAATTTTTT TGTAAAACTT
TTAGAAGAAA AAATAATAGT CATAAGAAAG ACTAGGGAGC CGAATCATTC AAAGCTTTAT
CTATTTAAAA CAAAAGAAAT ATCAGCACCA CATCTTTTTA TAACAGGTAG CAGCAACCTA
ACAAGAGCAG GACTTGTAAT CCAAAATGAG TTTAACGTTG AGATAAAAGA CTATGGATTT
GAAGAAGCAG AAAAGTATTT TGATGATTTA TGGAAAGATT CAATAGCATT GTCAGAAGAT
GATGTGAAAA AGTTAATTAA TACTATTAGA AATGAGACTG GGTTAAAAGA TGTAGACCCA
TTTTCAGCTT ATGTTTATCT ACTAAAAACA TACATTGATA CTCATAAGAC AAAAGACATA
AATAAAGACC TTATAGACCT TATGACGAAA AGAGGTTATA AAACATACTC TTATCAGATA
GAAGCTGTTT CTCAGGCTAT TGCAAACTGT AAATCTCACG GTGGAACGAT TTTAGCCGAT
GTTGTAGGTC TTGGAAAAAC CGTTGTTGCA TGCATGGTAG CAAAGGCATT AGGAAAAAGA
GGTATAGCCA TAGCACCACC TCATCTTATT GGACCTGATG ACAAATCTAC AGGATGGAAA
AAGTATTTAG AAGATTTTGA GCTGTATGGC TGGGAAACTT TCTCCGTTGG AAAGTTAGAT
AAAGCCTTAG AGTTTGTCAG AGAGCATGAT AGCATAGAAG TTGTAATAGT TGACGAAGCA
CACAGATTTA GGAATGAAAA TACTCTTAGC TATCATTATC TTAAAGAGAT ATGCAGAGGG
AAAACAGTAC TACTTCTAAC AGCAACACCT TTTAACAACA GACCTTCTGA CATTTTCGCA
CTTTTAAAAC TCTTTACCAT ACCAAAAAAA TCAACCATTG TATTTGACGA AGACCTTAAA
TCTAAATTTG AAGAGTACGA AAACCTTTTT AATAAACTTT CTTACATAAA AAACCATCAT
GGCTCTCCAA ACAAGAAAAA AAGAGAAAGA GCTTTAAACT ACTATAAAGA AATTTTTGGT
AAAAATAATG TAGTGGTAGA AATAGACAAA GTAAAAACAG AGACTAAGGA ATTAGCAAGA
CATATAAGGT CAATACTTGA ACCGGTAGTA ATAAGGAGAA ATAGGCTTGA TTTAAAGCAT
TACAAAGAAA AGATTGACCT GCCAGAAGTT AAAGACCCAA TAGAGTGGTT CTATAAGCTT
ACAAAAGAGC AGTCAGAATT TTATGATGAA GTAATATCAG CTTTTAAAGA GGAAGAGCTG
GGAGGAAGGT TCAAAGGTGC AATCTATATT CCAATTAAAT ATGAAAAAGG CATTAAAGAT
GACGATGAGC CAAAGTTAAA AGAAGAAGAA AGCTTTCTAC TTACATATCA AAGAAACCTT
TATGACTTTA TGAGAAGGCT TTTAGTTAAA AGATTTGAAA GTAGCTTTGG CTCATTCTAT
GAAAGTATAA AAAGATTTAA AAGCATTCAT GAAACAGCTT TAGATTTTAT TGAAAAAACA
AATAAGTTTA TCCTTGATAG AAAACTAATG GAAGATTTAA CAGAAAAAGA CCCGGATGAG
ATTTTAAAAG AGCTTGAAAA ATATGAGCAA AATTTAAAAG AGCAAAAGAC AAACGCTGAA
TATTACAAAG TTTACGACTT AAGTAAGTTT AAACAAAAAG ACAAATTTAT AAAAGACATA
CAAAACGACA TAAAGCTGTT TGATGAGTTT TTACAGAAGA TGGAAGAATT AAAACTTACG
CAAAACGACC CAAAGGTAGA TGAGCTTGTA GAAGGTGTTG AAAAGTTTTT AAAAGAAGGT
AGAAAAGTTG TCATATTTAC AGAATATACA GATACTGCAA AACATTTAGA TGAAATACTT
AAAAAACATT TTAAAAATAA AGTCTTAGTA GCCTATGGAA GCATAGGAAA AACAACCTTT
GAAGAGATAG CAAAAAATTT TGATGCACAG TATAAACATC AAGAAGATAA ATATAAAATC
CTGCTTACGA CGGATAAACT TTCTGAAGGA TACAACCTAA ACAGAGCAGG AGCGGTTATA
AACTACGATA TACCGTGGAA TCCTGTTAGA GTTATACAAA GAGTTGGAAG AATAAACAGG
ATAGGCAAAA AAGTATATGA TGAGATATAC ATAGTAAACT TCTTCCCAAC AGAACAAGGA
GCCGATATAG TAAGGTCAAG ACAGATAGCC CAAACAAAGA TGTTTATGAT TCATAGCATA
CTTGGAGAAG ATGCTAAAAT CTTTGACCCA TCAGAAGAGC CAGAAGCATC AAAACTCTAC
AAGAGATTAA ACGAATACAG AGAAGATGAA GAAGAAAGCT TCTTTACAAA AGTTAGAGAT
GAGCTTAGTC AGATAGAAGA AAGCTATCCG GAGGTTATAA AAGAAATACA AAACATGCCT
CATAGAGTAA AAACCGCTAA GCAGTCTGAC AAAAACGAGC TTATGGTCTT TATAAGAAAA
GGCAAAGACT TATTTGTAGG CTATAAAGAT TATGCAGAAA GACAACCAAA AACAGTAAGC
TTTGAAGAAG TTTATGAGAA GATAAAAGCT ACTCCGGAGA CAGAAAGATT AAAGATATCA
AAGGATTTTT GGACTAATTA CAAAATGGTT TTTGATAAAA AAGCATACAT AAAAAGAAAA
CCTAAACCAA GAGCCACAGA AGAAAAAGCT TTTAACCTAT TAAACGATTT GAAAAATAGA
GACATTGGAG AGTTAAGGTC CTTTGTTTTA GCTTTAATTA AAGATATTGA GGAGTATTCA
AGCCTTTCAG AGTATATCTT GCAAAGAATA ATCAAGATTG AAAAGCATCT TGATAACATA
GAAAAAGTAA AAAAAGAGTT AGAAGAGATT AAAAAAGAGA TTGGAGAAGA TTTTATAGAG
AGAGTAGAAA GTCAGTTAAA ATTGTTAGAT TTAGAAAATC AAGAAGTTAT TATGGCAGTA
GAAAATCAGA AGTTTACAGA TGAGATGTAG
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| Protein sequence | MSTFITNHGN KDLKRRLQEL IEISRELKFL VGFFYFSGIK EFYETLKNLY DEGKLSQEHI
KILVGLSVDK DNYGLYEVAT KLKSKDEYFQ ALINSVKIAF TSQELDNEDI HEQVNFFVKL
LEEKIIVIRK TREPNHSKLY LFKTKEISAP HLFITGSSNL TRAGLVIQNE FNVEIKDYGF
EEAEKYFDDL WKDSIALSED DVKKLINTIR NETGLKDVDP FSAYVYLLKT YIDTHKTKDI
NKDLIDLMTK RGYKTYSYQI EAVSQAIANC KSHGGTILAD VVGLGKTVVA CMVAKALGKR
GIAIAPPHLI GPDDKSTGWK KYLEDFELYG WETFSVGKLD KALEFVREHD SIEVVIVDEA
HRFRNENTLS YHYLKEICRG KTVLLLTATP FNNRPSDIFA LLKLFTIPKK STIVFDEDLK
SKFEEYENLF NKLSYIKNHH GSPNKKKRER ALNYYKEIFG KNNVVVEIDK VKTETKELAR
HIRSILEPVV IRRNRLDLKH YKEKIDLPEV KDPIEWFYKL TKEQSEFYDE VISAFKEEEL
GGRFKGAIYI PIKYEKGIKD DDEPKLKEEE SFLLTYQRNL YDFMRRLLVK RFESSFGSFY
ESIKRFKSIH ETALDFIEKT NKFILDRKLM EDLTEKDPDE ILKELEKYEQ NLKEQKTNAE
YYKVYDLSKF KQKDKFIKDI QNDIKLFDEF LQKMEELKLT QNDPKVDELV EGVEKFLKEG
RKVVIFTEYT DTAKHLDEIL KKHFKNKVLV AYGSIGKTTF EEIAKNFDAQ YKHQEDKYKI
LLTTDKLSEG YNLNRAGAVI NYDIPWNPVR VIQRVGRINR IGKKVYDEIY IVNFFPTEQG
ADIVRSRQIA QTKMFMIHSI LGEDAKIFDP SEEPEASKLY KRLNEYREDE EESFFTKVRD
ELSQIEESYP EVIKEIQNMP HRVKTAKQSD KNELMVFIRK GKDLFVGYKD YAERQPKTVS
FEEVYEKIKA TPETERLKIS KDFWTNYKMV FDKKAYIKRK PKPRATEEKA FNLLNDLKNR
DIGELRSFVL ALIKDIEEYS SLSEYILQRI IKIEKHLDNI EKVKKELEEI KKEIGEDFIE
RVESQLKLLD LENQEVIMAV ENQKFTDEM
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