Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1654 |
Symbol | |
ID | 6332548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1711846 |
End bp | 1712517 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642657929 |
Product | flagellar L-ring protein |
Protein accession | YP_001931806 |
Protein GI | 188997555 |
COG category | [N] Cell motility |
COG ID | [COG2063] Flagellar basal body L-ring protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAT TAATACTATT ATTCGGAATA ATAGGTTTTA TCACAGCAGG ATGTGCTAAA AAAACAGAGT ACGGAAAGCC ATTTAACCCA AATCCACCAG AGATAGAGCA AGAAAAGGTC GTAAGAACAC CCGGCTCTTT ATACACAGGC AGCTATAACA ATTTATTTTC CGATTCTAAA GCTTTCACGG TTGGAGATGT TATAACAATA AAAGTTGTTG AAAACATAGC TGGACAGACT GCTTCTAATA CAAATACACA AGAGCAACAG AAGATGGATT TAAACGTTCC ATCGCCAAAG CTAATGGGTA AAGATTTAAT AAATAAAACT CCAATAGCCG GCATAACAGA GCAAAACTCA GATACCCATA AAGGATCTGC ATCTACAAAC AGAAAATCAA CTCTAATAGC AACAATTTCT GCAAGAGTTA CAAAGGTTTA TCCAAACGGA AATTTATTTA TAGTGGGGAA AAAGGTTGTT AAAGTTAACG ATGATTATCA AACACTTGTA ATTTCAGGTA TTGTAAAGCC TACCGATATA ATGCAAGATA ACTCTGTAGA TTCTTCAAGA ATTTCGGATA TGTATGTAGA GTATAATGGA GAAGGTTATA TGGCAGATAG CTCAAGACCG GGTTGGTTAG CACAATTCTT AAAAAGAATC TGGCCGTTTT AA
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Protein sequence | MKRLILLFGI IGFITAGCAK KTEYGKPFNP NPPEIEQEKV VRTPGSLYTG SYNNLFSDSK AFTVGDVITI KVVENIAGQT ASNTNTQEQQ KMDLNVPSPK LMGKDLINKT PIAGITEQNS DTHKGSASTN RKSTLIATIS ARVTKVYPNG NLFIVGKKVV KVNDDYQTLV ISGIVKPTDI MQDNSVDSSR ISDMYVEYNG EGYMADSSRP GWLAQFLKRI WPF
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