Gene SYO3AOP1_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1654 
Symbol 
ID6332548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1711846 
End bp1712517 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content35% 
IMG OID642657929 
Productflagellar L-ring protein 
Protein accessionYP_001931806 
Protein GI188997555 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAT TAATACTATT ATTCGGAATA ATAGGTTTTA TCACAGCAGG ATGTGCTAAA 
AAAACAGAGT ACGGAAAGCC ATTTAACCCA AATCCACCAG AGATAGAGCA AGAAAAGGTC
GTAAGAACAC CCGGCTCTTT ATACACAGGC AGCTATAACA ATTTATTTTC CGATTCTAAA
GCTTTCACGG TTGGAGATGT TATAACAATA AAAGTTGTTG AAAACATAGC TGGACAGACT
GCTTCTAATA CAAATACACA AGAGCAACAG AAGATGGATT TAAACGTTCC ATCGCCAAAG
CTAATGGGTA AAGATTTAAT AAATAAAACT CCAATAGCCG GCATAACAGA GCAAAACTCA
GATACCCATA AAGGATCTGC ATCTACAAAC AGAAAATCAA CTCTAATAGC AACAATTTCT
GCAAGAGTTA CAAAGGTTTA TCCAAACGGA AATTTATTTA TAGTGGGGAA AAAGGTTGTT
AAAGTTAACG ATGATTATCA AACACTTGTA ATTTCAGGTA TTGTAAAGCC TACCGATATA
ATGCAAGATA ACTCTGTAGA TTCTTCAAGA ATTTCGGATA TGTATGTAGA GTATAATGGA
GAAGGTTATA TGGCAGATAG CTCAAGACCG GGTTGGTTAG CACAATTCTT AAAAAGAATC
TGGCCGTTTT AA
 
Protein sequence
MKRLILLFGI IGFITAGCAK KTEYGKPFNP NPPEIEQEKV VRTPGSLYTG SYNNLFSDSK 
AFTVGDVITI KVVENIAGQT ASNTNTQEQQ KMDLNVPSPK LMGKDLINKT PIAGITEQNS
DTHKGSASTN RKSTLIATIS ARVTKVYPNG NLFIVGKKVV KVNDDYQTLV ISGIVKPTDI
MQDNSVDSSR ISDMYVEYNG EGYMADSSRP GWLAQFLKRI WPF