Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1613 |
Symbol | |
ID | 6332145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1672579 |
End bp | 1673619 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642657888 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_001931765 |
Protein GI | 188997514 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAAGCA GGGTTTTCCT TTATATGATT GTTTTAACTT CTTTTGTTTT ATTCTCTTGT AATGAAAAAA GTAAAAGCTC TGATAATGAA AAAAATACAA AAAAGCAAAT TCAAACAGTG GAAGTAGTTT ATCAAGAAGT ACCAGATTAC ATTGAAGCAA CAGGGTTAGT ACAGCCAGAT AAAGATGGTA CTGTAAAAAT AACCTCCAAA TTGCCAGGAA TAATTCAATC GATCAATGTT CAGGTTGGAG ATTATGTTAA AAAAGGTCAA GTCTTGGCAT CTGTAAAAGC ACCAGACACA ACAGATTTAT ACTCACAGAA AGTAGCCTTG TCTGTTCAAC TGTCTCAAGC AGAAAGAATT TACAAACTAA AAAAAGAGTT GTACGAAGTT GGAGCAATTC CAAAAGCAGA GTTGATGGAT GCTGAAACAA ATTACAATGT ACTAAAAGCA CAGCTGAAAG GCATTGAAGA AAAGATGAAA CTTTTAGGTG GAACTCTTGG TTCAAGTGTT ATCACTTCTC CAATTGATGG AATTGTGTAT CAGATAAACA GTCATGTTGG AGATTCTGTT GACCAAACAA CTGAAATATT AAGCTTAGTT AATCCAAACA AAATAATGGT AGTTGCATTA GTTCAGGATA AAGACGTGTT TAAACTTAAA GAAGGTGACG ATGTTGATTT TTCTATTGAT TTATTCCAGG ATAAAAAATT TCAAGGAGTT GTTAAATACA TAAGCGACGT TGTAGACCCG GATACTAAAA AAATTAAAGT ATTTATAGAA CCAAAAGAAA AAGAAGCACT AAAAATAAAT ATGTTTTTCA ATATAAGAAT ATACACAGGC AAACAGACCC ATGCAGTTAT CCCGCAAAAA GCATTGATAT ACAAAGATGG TAAATTTTAC GTCTATGTAG AAGAAAATGG AAAGCTAATC AAAAAAGAGG TTAAATTTAT CAAAGAACTT GAAAATAACA AAGTATCCGT TGACGGTTTA AATCAAGGTG AAAAGGTTGT TGTTGACCCT TTGTTGGAGG AACATACGTG A
|
Protein sequence | MISRVFLYMI VLTSFVLFSC NEKSKSSDNE KNTKKQIQTV EVVYQEVPDY IEATGLVQPD KDGTVKITSK LPGIIQSINV QVGDYVKKGQ VLASVKAPDT TDLYSQKVAL SVQLSQAERI YKLKKELYEV GAIPKAELMD AETNYNVLKA QLKGIEEKMK LLGGTLGSSV ITSPIDGIVY QINSHVGDSV DQTTEILSLV NPNKIMVVAL VQDKDVFKLK EGDDVDFSID LFQDKKFQGV VKYISDVVDP DTKKIKVFIE PKEKEALKIN MFFNIRIYTG KQTHAVIPQK ALIYKDGKFY VYVEENGKLI KKEVKFIKEL ENNKVSVDGL NQGEKVVVDP LLEEHT
|
| |