Gene SYO3AOP1_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1613 
Symbol 
ID6332145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1672579 
End bp1673619 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content32% 
IMG OID642657888 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_001931765 
Protein GI188997514 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGCA GGGTTTTCCT TTATATGATT GTTTTAACTT CTTTTGTTTT ATTCTCTTGT 
AATGAAAAAA GTAAAAGCTC TGATAATGAA AAAAATACAA AAAAGCAAAT TCAAACAGTG
GAAGTAGTTT ATCAAGAAGT ACCAGATTAC ATTGAAGCAA CAGGGTTAGT ACAGCCAGAT
AAAGATGGTA CTGTAAAAAT AACCTCCAAA TTGCCAGGAA TAATTCAATC GATCAATGTT
CAGGTTGGAG ATTATGTTAA AAAAGGTCAA GTCTTGGCAT CTGTAAAAGC ACCAGACACA
ACAGATTTAT ACTCACAGAA AGTAGCCTTG TCTGTTCAAC TGTCTCAAGC AGAAAGAATT
TACAAACTAA AAAAAGAGTT GTACGAAGTT GGAGCAATTC CAAAAGCAGA GTTGATGGAT
GCTGAAACAA ATTACAATGT ACTAAAAGCA CAGCTGAAAG GCATTGAAGA AAAGATGAAA
CTTTTAGGTG GAACTCTTGG TTCAAGTGTT ATCACTTCTC CAATTGATGG AATTGTGTAT
CAGATAAACA GTCATGTTGG AGATTCTGTT GACCAAACAA CTGAAATATT AAGCTTAGTT
AATCCAAACA AAATAATGGT AGTTGCATTA GTTCAGGATA AAGACGTGTT TAAACTTAAA
GAAGGTGACG ATGTTGATTT TTCTATTGAT TTATTCCAGG ATAAAAAATT TCAAGGAGTT
GTTAAATACA TAAGCGACGT TGTAGACCCG GATACTAAAA AAATTAAAGT ATTTATAGAA
CCAAAAGAAA AAGAAGCACT AAAAATAAAT ATGTTTTTCA ATATAAGAAT ATACACAGGC
AAACAGACCC ATGCAGTTAT CCCGCAAAAA GCATTGATAT ACAAAGATGG TAAATTTTAC
GTCTATGTAG AAGAAAATGG AAAGCTAATC AAAAAAGAGG TTAAATTTAT CAAAGAACTT
GAAAATAACA AAGTATCCGT TGACGGTTTA AATCAAGGTG AAAAGGTTGT TGTTGACCCT
TTGTTGGAGG AACATACGTG A
 
Protein sequence
MISRVFLYMI VLTSFVLFSC NEKSKSSDNE KNTKKQIQTV EVVYQEVPDY IEATGLVQPD 
KDGTVKITSK LPGIIQSINV QVGDYVKKGQ VLASVKAPDT TDLYSQKVAL SVQLSQAERI
YKLKKELYEV GAIPKAELMD AETNYNVLKA QLKGIEEKMK LLGGTLGSSV ITSPIDGIVY
QINSHVGDSV DQTTEILSLV NPNKIMVVAL VQDKDVFKLK EGDDVDFSID LFQDKKFQGV
VKYISDVVDP DTKKIKVFIE PKEKEALKIN MFFNIRIYTG KQTHAVIPQK ALIYKDGKFY
VYVEENGKLI KKEVKFIKEL ENNKVSVDGL NQGEKVVVDP LLEEHT