Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1608 |
Symbol | |
ID | 6332140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1664228 |
End bp | 1667212 |
Gene Length | 2985 bp |
Protein Length | 994 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642657883 |
Product | ATPase AAA-2 domain protein |
Protein accession | YP_001931760 |
Protein GI | 188997509 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000771621 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAGTG AAAATTTATT AGAAAGAAAA GCAAAAAATT TGTTAGAACA GGCTAAAAGT ATCGCATTTA AAAACAATGA CTCAATGGTT GATACAGACC ATTTACTTTT GGCGTTAATA TCTAAAGATG ATTCACCACT TTTAAAGATT CTTGAAAAGA GAGGTATTGA TAAGAAAGCT TTAAAAGAGA ATATTACATC ATACTTAAAT GACATTTACT CTCAAATAAA TAAAGCTGTA GAGGACTATT CAAATTATTT AAAGAATTTA CAATCCCAGT TAACACAAGC AAGAAATCAA GCTCTTGAAA TATACAAAGA GCTTAGAAAT GTAAAGGCTC AAAAAGAGAG ATTAAAAAGA GATTTATCTT ATGAAAGGGA ATTTTTCTTT GGTGGTGGAA GTAGGTTAGA GCTTGAAAGA TTGACCATAT ACGAAAAACA GCTTGAGTCT AATTTAAACT CATTAAAATC TCAATTAGCT CAGCTAACGG ATTCTAACAC TGCTGATAAA TTTTTATCCG GTGATATAAA TCTTTTGTCA TTCCTATATA AGATTATAGA AAACCATTCA TTAATCAAAC AAATCGAAGA CCTTGGATTT TCTAAGGATA GATTTGTAGA AAAAATCATT GAAAATGTCA CAGGCTCAAA AACTTCAAAA GTATATTCAT CAAAGCTTAT TAAAGTTTTA GAAAATGCTG AAAAAATTGC ATTTAACAGT GGCTCTAATA CAGTTGGCAT TGTTCATATA GCAACATCTT TGGTAGATAG TAAAGACACA ATAGCTGGTA AAATTTTAGA TGAAATATTA AATTTTGAGA AAAAAGAAGG AGGAAAGAAA GCAATGGACG AGAAAAATAT TCAGCAAGAA ATGGCAGAAG AGGAAAAATC TGCATTAGAG AGATTTACTG TTGATTTAAC AAAATTAGCA AAAGAAGGAA AATTAGACCC GGTAATTGGA AGAGAGAGAG AAATTCAACA AGTTATAGAA ATCTTACTCA GAAGAACTAA AAACAACCCA GTATTGATTG GAGAGGCTGG AGTTGGTAAA ACAGCTATTG TAGAAGGTTT AGCACAAAAA ATAGTAAACA AAGAAGTTCC GGAGGAGCTT CAAAATAAAA AGGTGTTATC TCTTGACCTT GGCGGTCTTG TTGCAGGCAC AAAGTACAGA GGTGAATTTG AAGAGAGAAT GAAATCTCTT ATCGATGAGC TAAAAAAAGA CCCTAACATC ATACTATTTA TAGACGAATT ACACACAATC GTTGGAGCGG GTAAAGGAGA AGGCGCTTCT GATGCAGGAC AACTTCTAAA ACCAGCCCTT GCAAGAGGAG AAATTAGAGT TATAGGTGCA ACGACACTTG ACGAGTACAG AAAATATATA GAAAAAGACC CAGCATTAGA AAGAAGATTT CAGCCTGTAT ATGTAGAAGA GCCGGATATT GATACAACAA TAGAAATACT AAAAGCTTTA AGACCAAAAC TTGAAAAACA TCACAACGTA AAAATAAGTG ATAAAGCAAT AGAAGCAGCA GCAAAATTAA CCGGCAGATA CATACCGGCA AGAAAATTCC CGGATAAAGC GATTGATGCC CTTGACCAAG CATGTGCAAG AAAAAAACTA AAGCTTGTCT ATGCATCTCC AGAAGTTATT GAACTTGAAA GAAAAATCAA AATGTTAGAC GAACAGATAA TACAGGCTTC CTTAGATGGA GATTATGAGA AAGAAGCAAA ACTAAAAATA GAAAAAGCAA ATCTTGAAAA ACAACTTAAA GATTTAAAAA CTAAATCTTC AAACGAAAGA ACAAAACTTG AAGAATTACA AAGACAGCTT GAAGAAATTG AAAAGCAGAT AGAGTTCTAC AGCCAAAAAG GCGATTATGA AAAAGAAGCT GAATACAAGA TTAAAAAAGC TCAAATAGAA AAAGAGATAA AAGCTCTACA ACAAAAACTT GCTGAGTCTG TAGTTGTTAC AGAAGATGAT GTTGCAGAAG TTATAGCAGA ATGGACCGGA ATTCCTATAT CTAAGATGAA AGAAGAAGAG ATGGAAAGAC TGCTTCACTT AGAAGAAGAA ATGCATAAAC GTTTAATAGA CCAAGAACAT GCAGTTAAAC TAGTTGCAGA AGCTATTAGA AGAGCAAGAG CAGGATTATC AGACCCAAGA AAACCACTTG CATCATTTAT GTTCTTAGGA CCAACAGGTG TAGGTAAAAC AGAGCTTGCA AAAACATTAG CAGAACTTTT ATTTGACGAT GAAGATGCGT TAATCAGATT AGATATGTCA GAATTTAAAG AAGAGCATTC TATTGCAAAA TTAATCGGTG CACCTCCAGG ATACGTAGGA TATGAAGAAG GTGGAAAGCT TACAGAAGCA GTAAGAAGAA GACCCTACAG TGTTATTCTA CTTGACGAGA TAGAAAAAGC TCATCCAAGA GTATTTGACT TATTCTTACA AGTACTTGAT GATGGAAGAC TTACAGACTC TCAAGGTAGA ACTGTAAACT TTAGAAACAC TGTAATCATA ATGACTTCTA ACATCGGTAG CCAATACTTA ACACTTATAC CGGTAGATGC TCCGGAAGAG GTTATTGAGA AAGAGTTTGA AATCGCTAAG AAGAGAGTTC TTGAAGAAGT TAAAAACTAC TTCAGACCAG AATTTTTAAA CAGAATAGAT GAAATAATTG TATTTAAGCC ATTATTCAAG AAAGATATCA TACAAATAAT AGACTTAATG GTAAATGCTC TTAATAAGAG ATTGCATGAT AGAAATATTA AAGTTGAGCT TACAGATAAG GCTAAAGAAG TATTGATGAA GCTTGGTTAT GACCCACTTT ATGGTGCAAG ACCTATGAGA AGAGCTATAC AAAAATACCT TGAAACACCA TTATCAGAAA AAATACTTAG AAGAGAAGTT AAAGAAGGCG ACACCGTTAT AGTAGATGCT GATGAAACCG GTGAAAATTT AGTATTTACT GTAAAACAAA GTTAG
|
Protein sequence | MFSENLLERK AKNLLEQAKS IAFKNNDSMV DTDHLLLALI SKDDSPLLKI LEKRGIDKKA LKENITSYLN DIYSQINKAV EDYSNYLKNL QSQLTQARNQ ALEIYKELRN VKAQKERLKR DLSYEREFFF GGGSRLELER LTIYEKQLES NLNSLKSQLA QLTDSNTADK FLSGDINLLS FLYKIIENHS LIKQIEDLGF SKDRFVEKII ENVTGSKTSK VYSSKLIKVL ENAEKIAFNS GSNTVGIVHI ATSLVDSKDT IAGKILDEIL NFEKKEGGKK AMDEKNIQQE MAEEEKSALE RFTVDLTKLA KEGKLDPVIG REREIQQVIE ILLRRTKNNP VLIGEAGVGK TAIVEGLAQK IVNKEVPEEL QNKKVLSLDL GGLVAGTKYR GEFEERMKSL IDELKKDPNI ILFIDELHTI VGAGKGEGAS DAGQLLKPAL ARGEIRVIGA TTLDEYRKYI EKDPALERRF QPVYVEEPDI DTTIEILKAL RPKLEKHHNV KISDKAIEAA AKLTGRYIPA RKFPDKAIDA LDQACARKKL KLVYASPEVI ELERKIKMLD EQIIQASLDG DYEKEAKLKI EKANLEKQLK DLKTKSSNER TKLEELQRQL EEIEKQIEFY SQKGDYEKEA EYKIKKAQIE KEIKALQQKL AESVVVTEDD VAEVIAEWTG IPISKMKEEE MERLLHLEEE MHKRLIDQEH AVKLVAEAIR RARAGLSDPR KPLASFMFLG PTGVGKTELA KTLAELLFDD EDALIRLDMS EFKEEHSIAK LIGAPPGYVG YEEGGKLTEA VRRRPYSVIL LDEIEKAHPR VFDLFLQVLD DGRLTDSQGR TVNFRNTVII MTSNIGSQYL TLIPVDAPEE VIEKEFEIAK KRVLEEVKNY FRPEFLNRID EIIVFKPLFK KDIIQIIDLM VNALNKRLHD RNIKVELTDK AKEVLMKLGY DPLYGARPMR RAIQKYLETP LSEKILRREV KEGDTVIVDA DETGENLVFT VKQS
|
| |