| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1604 |
|---|
| Symbol | |
|---|
| ID | 6332185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 1657988 |
|---|
| End bp | 1659901 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642657879 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001931756 |
|---|
| Protein GI | 188997505 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000507876 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCA ACAAAAATAA AAGATTAATA ATAACTTCTA TGTTAGCTTT AAACTCTTTT
ACCGTCTTTG GACAAGAAAA TATATCAACA TTATTATCTA CATATGAAGA ATCTATGGAC
TTAACCAATA AAACAAGAGT TGAAAGCCTT GGTCATTATA TCCTCATTAC AAGAAAAGAA
ATTGAAATGA TGCAGGCTAA CAAACTTTCA GATATACTTA AATCATTAAA GCTACACACA
TTTATACAAA ATAGTTTTGG AGTTTACCAA TTAACATCAG CCGGTGGAGG AGTTGGAGTT
ACAACTTCAT ACAGATTGTT TATAAACGAC CATGAAGTAA GCTCATTGCA TACAGATAAT
CCATTCCTTA TATACGACAA CTATCCATTA GATAGTATAG ACCATATAGA GATTTGTATG
GGGGCAGGTG CTGTTAGAAT TGGAAATGAA CCATCAATAA TATTGATTAA ACTATACACA
AAACAGCCCG ACAGAGAAAA TGCCTCCGTA TTTAAAACAT TTGTATCAAC AACAAAAGAT
TATGGATTTA GCTTTACAGA TGCAAGAAAG CCAAAAGAAA ATTTTTCTTA TTTAGTAAGC
GTATATCAAG GATATGATAA TCTTAAAACT CAACATTTAA ACAACACTCC ATTAGATAGA
GATAATTTTA GACAGCATGC ATTTTTTCAA TTTAACTACT ATGATACATC TATAGATATA
GGTTTTTCTC GTGTAAAAAG GGATGCTTAT ATGGGGCTTG CAGTAGATAG AACTCCAGAT
TTTTCTAAAA CAAGCTCGGA AGATGCTTAT ATATCAATAA CTCAGTATTT GCTTGATGAC
AAATCATTAA AACTAAATTT TGCCTACGAT GAAAACAGAA GAAAAGGAGA GTTTGAAAAT
AACGGCTTGT ATTTACCAGC CTTAGGATTT CCATATTATA TGGGTGTAAA TTATTACTAT
GAAAACAGAA ATCTTAAAAA ATATACATTT TATATATCAA AAGAGTTTAA AACAGATAGA
AATGTATTAC TCATAGGAAG CTCTGCAAAG TTTAAGAAAA ATGATATATC AGATATTTAT
CCTTCAGCTT TAAGAGATAA ATACAAGTTC AAAAATCAAA ACTTATACAC TGTTTTCGTA
GAAAACCAAT TTAATATAAA TGAAAAGAAT CTTTTATTTA TAAGTTTAAA ATATGACCAT
TATGATAGAG ATGGTGGATT AGAAGAACTT AATAAGTTTA TCTCTAGATT AGGTTTTATA
TCTTACATAA ATAACGACCT TTATATCAAA GGATTTTTAA CAAAAACTTA TGTTCCCCCT
TCTTTTTACG AAATTGAAAG CAGTCAAGAC CCAAAAAATT TAAAATCAGA AGATGTAAAA
GGTGGCAGTT TAGAATTAAA CTATGAGAAA AATAAGAATA AATTTCAATT ATTTTACGGA
TATATTACAA TGGAAAAGCT TATTGGTTTT AGACAGTTTG GAACCTATAA CTCAGATAAA
TCAATAAAAT CTAATCTGTT TGCTTTTGAT TATGAACGCA GGGTAGACGC AAATAAAAAA
TTTAACTTTT CTGCTTACAA AAATTTTATT AATTTTAACT CAACCAAATT AAGTCCAACA
TTTGGATGGT ATGTTAGATA TTTACAATCT GTAGATAAGT TTGACCTTTT TGGAGAGCTA
ATATATAGAG AGGGCTTTAC TGTATCTGAT GGCAGCAAGG TAAGCCAAAG CTACAACTTA
AACACCGGTA TAATTTATCA TCATTCGTCA AATCTAAGCA TAAAACTAAA AGGAGAAAAC
TTGTTAAACA GCTCTATGAA ATCTGTTTTT TCACCAATAC CATCTATGCT TCCAGCAAGT
GTGTTTAACG CATATGATAG AAAAATTTTA ATTACTATAG AAAAGGTATT TTGA
|
|---|
| Protein sequence | MIINKNKRLI ITSMLALNSF TVFGQENIST LLSTYEESMD LTNKTRVESL GHYILITRKE
IEMMQANKLS DILKSLKLHT FIQNSFGVYQ LTSAGGGVGV TTSYRLFIND HEVSSLHTDN
PFLIYDNYPL DSIDHIEICM GAGAVRIGNE PSIILIKLYT KQPDRENASV FKTFVSTTKD
YGFSFTDARK PKENFSYLVS VYQGYDNLKT QHLNNTPLDR DNFRQHAFFQ FNYYDTSIDI
GFSRVKRDAY MGLAVDRTPD FSKTSSEDAY ISITQYLLDD KSLKLNFAYD ENRRKGEFEN
NGLYLPALGF PYYMGVNYYY ENRNLKKYTF YISKEFKTDR NVLLIGSSAK FKKNDISDIY
PSALRDKYKF KNQNLYTVFV ENQFNINEKN LLFISLKYDH YDRDGGLEEL NKFISRLGFI
SYINNDLYIK GFLTKTYVPP SFYEIESSQD PKNLKSEDVK GGSLELNYEK NKNKFQLFYG
YITMEKLIGF RQFGTYNSDK SIKSNLFAFD YERRVDANKK FNFSAYKNFI NFNSTKLSPT
FGWYVRYLQS VDKFDLFGEL IYREGFTVSD GSKVSQSYNL NTGIIYHHSS NLSIKLKGEN
LLNSSMKSVF SPIPSMLPAS VFNAYDRKIL ITIEKVF
|
|---|
| |