Gene SYO3AOP1_1563 details

Gene Information

• Locus tag: SYO3AOP1_1563
• ID: 6331158
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurihydrogenibium sp. YO3AOP1
• Kingdom: Bacteria
• Replicon accession: NC_010730
• Strand: +
• Start bp: 1612378
• End bp: 1612782
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 642657838
• Product: ATP synthase F1, epsilon subunit
• Protein accession: YP_001931715
• Protein GI: 188997464
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.000113638
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAGAT TGGATGTAGT TACTCCAACT GGTAGTGTAT TTAGCGGTGA TGTTTATCAA 
ACGGTAATTA CAACGGCTGA TGGCGAAATT GGTATACTTG AAAACCATAT GCTACTACTT 
ACAAATATAA CTCCTGGAAA GTTAAGAATC GAGAAAGCTG ACGGAGAAGT AAAGGAATTT 
GCGGTGACTT ATGGTGTATT AGATGTTAGA GGCGACAAGG TTATTGCTCT TGTAGAAGAA 
GTTTTTGAGC TTGATGAAAT TAATGTTGAT AACGAAAAAC AACTTTTAGA AGAAGCTAAT 
CAAAAACTAC AAAACGAAAA TCTTTCAGAA GAAGAAAAAG AACATTACGA AAAACAAAGA 
TCAAGGTCGC AAGCATTATT AAATCTTGCA TCAGCTAAGG TTTAA 

 

Protein sequence

MYRLDVVTPT GSVFSGDVYQ TVITTADGEI GILENHMLLL TNITPGKLRI EKADGEVKEF 
AVTYGVLDVR GDKVIALVEE VFELDEINVD NEKQLLEEAN QKLQNENLSE EEKEHYEKQR 
SRSQALLNLA SAKV