Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1521 |
Symbol | |
ID | 6332431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1563393 |
End bp | 1565288 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642657798 |
Product | transglutaminase domain protein |
Protein accession | YP_001931676 |
Protein GI | 188997425 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTAT CGGTTGAAAA CATAGTTAAG ATAAATGCTT ACGTAGGAAG TCTATTTATT TTTCTTTTAA TTTTTAAAGA AGTTAGTCTA GCATACAGCT TTATTTTTAT AGCTTTATAT GCACTTTCAG CCTACAAAGA TTTTAAAAAG CCTTTAAACA TAAATAGAAC GTTTATAAAC ATTACCGGTA TTTTATTTGT AATATTATTG GTTTTAAGAA TAAATCCTGA CAATATCGTT CAGCCTTCGG TGGAAACTCT TCTAGTCTTA CTTGGTTTAA AACTTCTTGA AGAAAAAGCA TTCAGAGATT ACATGCAGAT ATATTTGTTA ATTATTCTGC TTTTTGCAGG ATACACAATT CTTTCAACCA GCATGATATT TTTACTATAT CTTTTGATAT TAATCTTTTT TATAAACGCA TCAGTAATAC TTTTAACATA CTACCAGCAG AATAAAGAGA TAGAGTTAGA TATTAGCGTA ATAAAAAGAA TTTTGATAAA AACAGCTATT ATTCCACTAC TTTCTATTCC TTTCATGATT TTTCTATTTT TTACACTACC AAGAAGTAAT TATCCATTCT TAAACTTTCT ACAAGGTCAA GGAAAAGCTT CAACCGGATT TTCTCAAGAT GTAAAACTTG GTGATGTTTC CAACATTCAA GAAGATGATT CTGTCGTAAT GAGAGTTTCG GGAGAGAATA TCGGAGAAAT TTACTTAAGG GGTTTAACTT GGAATTACTT TGATGGAAAA CAGTGGATGT CTAAGGATTT ATTTTCAGCA GTTAAAGCAA GAAGATTGTT TGGTAAAAAA TATGAATACA CAGTTTACTT AGAACCACAT TCAGATATTT ATTTATTTAC TGTCGAATAT CCGTATGCAA TATCACAGAT AAGCGGCTAT TTTATTACTC CAAGAATGGA TAAAACATAC GTTGTTGATA AACCTATATT TAACAAAATT AAATACTCGG GTATTTCTTT TATCAATGAT AGATACTATG AAGAGTTAAA GTCTATGGAT GAATACTTAC AGCTTCCGAA ATTAAATGAA TCTATAATCA AATTAGCCAA AGATTTAAAT GGAAATGACA AAGAAGAAAC GGCAAAAAAC ATAGAGAAGT TTTTAAAAAG TTATACATAC TCATTACAAA ACCTATCTGT TAGCCAAGAC CCTATTTATG ACTTTCTGTT TGTAAAAAAG CAAGGAAACT GTGAATATTT TGCATCATCA ATGGTTATAC TGCTTAGGTT AAACGGCATA CCTGCAAGGC TTGTAGGTGG TTATAAGACA GCTACTTACA ACCAAACAGC CAACTACTAC ATAGTTAAAC AAAAAGATGT ACACGTTTGG GCTGAAGCAT ACATAAACAA GCATTGGATA AGATTTGACC CTACACCGGC AGCAAGAAAT GCAATCATAG AAAGAGAGAA AAAGCTAAAC AAATTTAAAC TTTGGCTTGA TACTATAAAT TACTACTACA CAACCTTTAT CGTAAACTAT GATTTTTCTA AGCAAGTTGA ACTTTTCAAT AAAGTTAAAA AAAGCTTTTC TAATATTAGA GACTCTAAAA AGATAGAGTT TAACTTTAAC AAAAACTATC TCATTTTTAC AATAATTTTG CTATTGGCAG GCTATTTAAT ATTTTTATCT ATCAAATACT TAAAACAACC TTATGAAAAA AGATTGCTAA ATATATTAAA TAAAAGATTA AAAAAGTATG GCTATGAAAG AAAGGGAAAC GAAGGATTGG AAGAGTTTAT CTCAAGAGTA GAGAATGCAG AGCTTAAGCA AAAACTTTTA ACATTTGCAA GAGAGCTTGA AAGTTATGTA TATAAAGATA AAAAATTAAG CAAGGCTGAT TATGAGAGAT TAAAAAAGAT GATAGAAAAA TTATAA
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Protein sequence | MKLSVENIVK INAYVGSLFI FLLIFKEVSL AYSFIFIALY ALSAYKDFKK PLNINRTFIN ITGILFVILL VLRINPDNIV QPSVETLLVL LGLKLLEEKA FRDYMQIYLL IILLFAGYTI LSTSMIFLLY LLILIFFINA SVILLTYYQQ NKEIELDISV IKRILIKTAI IPLLSIPFMI FLFFTLPRSN YPFLNFLQGQ GKASTGFSQD VKLGDVSNIQ EDDSVVMRVS GENIGEIYLR GLTWNYFDGK QWMSKDLFSA VKARRLFGKK YEYTVYLEPH SDIYLFTVEY PYAISQISGY FITPRMDKTY VVDKPIFNKI KYSGISFIND RYYEELKSMD EYLQLPKLNE SIIKLAKDLN GNDKEETAKN IEKFLKSYTY SLQNLSVSQD PIYDFLFVKK QGNCEYFASS MVILLRLNGI PARLVGGYKT ATYNQTANYY IVKQKDVHVW AEAYINKHWI RFDPTPAARN AIIEREKKLN KFKLWLDTIN YYYTTFIVNY DFSKQVELFN KVKKSFSNIR DSKKIEFNFN KNYLIFTIIL LLAGYLIFLS IKYLKQPYEK RLLNILNKRL KKYGYERKGN EGLEEFISRV ENAELKQKLL TFARELESYV YKDKKLSKAD YERLKKMIEK L
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