Gene SYO3AOP1_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1515 
Symbol 
ID6332109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1557622 
End bp1558569 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content30% 
IMG OID642657793 
Productglycosyl transferase family 9 
Protein accessionYP_001931671 
Protein GI188997420 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAAGAT TTTCATCTCT TGGAGATGTT ATCCTATCTT CTGTCGTTTT AGACCCTTTA 
TATGAAAAAG ATTACAATGT AGATTTTTTG ACGTTTAAAC CATTTAGCGA TGTGTTTGAA
AAAGACTATA GAATAAAAAA TCTGATTGCT GTCGATAAAT CAAGACTTAA AAGCATCTCA
GATATTTACA GTTTTACCAA ATCCTTAGAT AAATACGATT ATGTTTTAGA CCTGCATTCT
AACCTACGGT CTTATTTGAT TGGGTTTTTC TTAAAGCTGA GATACAATCC AAAAATTCTA
AGATATAAAA AACAGTCTTT AAAAAGAAGA TTAAAGATTT TAGACCCAAA CTTCAATGTT
TTAAAAGTAT ATCTTGAGCC ACTAAAAAAA CTTGGTATAG AAAATTTAAA TTACAGACCA
AAAGTAATTA TCACAAACCA AGAAGTTGAA AAAGTAAAAA CCTTTTTGCC ACAAAAATTT
ATATCTCTTG GAACAGGTGC AAGGTATAAA AGTAAGGTTT ATCCGTACTA CAAAGAGTTA
TCTGAGATTT TACTTGAAAA TGGATTTAAT GTTGTTTTGG TTGGTTCTAA AGAAGATTTA
GAGATGGATA AAAGCATCTA TCCAAAAGAA GTTTTAGATT TAAGAGGAAA AATAACCTTA
AGAGAAACCA TTACTGTAAT ATCACAAGGA TTGGCAACTA TAAGCAACGA CTCAGCCATA
GCCCATATGT CAAGAGCTGT TGGCATTAAA GTTTTGATGA TATACGGCTC AACTCATCCA
TACTTTGGAT TTGCACCATT AAAAGATGAA GGAGATTATA TCTTTAAAAA TCTACCATGT
CAGCCTTGTT CGCTTCACGG ACAAAACAGC TGTAAGTATA AAACTTTTGA ATGTTTAACA
TCCATCTCTC CCCAAGAAGT TTATAATAAG CTGAAAAATT TGATATAA
 
Protein sequence
MIRFSSLGDV ILSSVVLDPL YEKDYNVDFL TFKPFSDVFE KDYRIKNLIA VDKSRLKSIS 
DIYSFTKSLD KYDYVLDLHS NLRSYLIGFF LKLRYNPKIL RYKKQSLKRR LKILDPNFNV
LKVYLEPLKK LGIENLNYRP KVIITNQEVE KVKTFLPQKF ISLGTGARYK SKVYPYYKEL
SEILLENGFN VVLVGSKEDL EMDKSIYPKE VLDLRGKITL RETITVISQG LATISNDSAI
AHMSRAVGIK VLMIYGSTHP YFGFAPLKDE GDYIFKNLPC QPCSLHGQNS CKYKTFECLT
SISPQEVYNK LKNLI