| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1498 |
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| Symbol | |
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| ID | 6331887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1542985 |
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| End bp | 1544154 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657776 |
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| Product | nucleotide sugar dehydrogenase |
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| Protein accession | YP_001931654 |
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| Protein GI | 188997403 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAG CCGTTGCAGG TGCTGGTTAT GTTGGATTAT CTAATGCTAT CTTGCTTGCC
CAAAACCATC AAGTTGTAAT TAAAGACATA GACCCTCAAA AAGTCAAGCT GATCAATGAA
AAAAAATCTC CAATTATAGA TAAAGATATT CAAGAATACT TAGCAACTAA AAATTTAAAC
ATAAAGGCTA CCTTAGACCC GCAGGAAGCT TACAAAGATG CAAAGTATGT AATAATCGCA
ACTCCTACAG ATTATGATCC TATTACAAAC TACTTTAATA CAAAATCAGT AGAATCTGTC
ATAAAAGAAG TTTTAACAGT AAATCCTGAT GCTGTAATGG TCATTAAATC TACTATTCCT
ATTGGATACA CAGAAAGCAT AAAGAAAAAA TTTAATACAG AAAATATTAT TTTTTCTCCT
GAGTTTTTAA GAGAAGGTAA AGCTTTATAC GATAATCTCT ATCCTTCAAG GGTTGTAGTT
GGTGAAAAAA GTGAGAGGGC AAAGGAGTTT GCAAATCTGT TGTTAGAAGG TGCTATAAAA
AAAGATGTTC CGGTTTTATT TACAGGCTCT ACTGAAGCAG AAAGTATAAA GCTTTTTGCA
AATACATATT TAGCCATGAG AGTTGCATTT TTTAATGAGC TTGATACTTT TGCTGAAAGC
CATGGATTAA ATTCTAAAGA AATTATTGAA GGGGTATGTT TAGACCCAAG AATAGGCATG
CATTATAATA ATCCATCTTT TGGATTTGGA GGCTACTGCT TGCCAAAAGA TACAAAACAA
TTAATGGCTA ACTACTTAGA AAAAGGAATA CCACACTTTT TAATCAAGGC TACAGTTGAA
TCAAACATTG CAAGGAAATA CTATATAGCA GAAAAGATTA TAAGCTTAAA CCCAAAAATC
GTTGGCGTTT ATAGACTTAC AATGAAATCG GATTCAGATA ATTTTAGAGA AGCTGCAATT
ATAGATATAA TTGAGTATTT AAGGGCAAAA GATGTTCAAG TTATAATTTT CGAACCTTTA
CTAAAAGAAA GTAAGTTTAT GGATTTTGAT GTTGTATCCT TAGAGAGATT AAAAAAAGAA
TCTGACATTA TCCTTGCTAA CAGATATAGC TCTGATTTAG ATGATGTGAG AGAAAAGGTT
TACACAAGAG ATGTTTTTTA TAGGGATTAG
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| Protein sequence | MKIAVAGAGY VGLSNAILLA QNHQVVIKDI DPQKVKLINE KKSPIIDKDI QEYLATKNLN
IKATLDPQEA YKDAKYVIIA TPTDYDPITN YFNTKSVESV IKEVLTVNPD AVMVIKSTIP
IGYTESIKKK FNTENIIFSP EFLREGKALY DNLYPSRVVV GEKSERAKEF ANLLLEGAIK
KDVPVLFTGS TEAESIKLFA NTYLAMRVAF FNELDTFAES HGLNSKEIIE GVCLDPRIGM
HYNNPSFGFG GYCLPKDTKQ LMANYLEKGI PHFLIKATVE SNIARKYYIA EKIISLNPKI
VGVYRLTMKS DSDNFREAAI IDIIEYLRAK DVQVIIFEPL LKESKFMDFD VVSLERLKKE
SDIILANRYS SDLDDVREKV YTRDVFYRD
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