Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1497 |
Symbol | |
ID | 6331886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1541887 |
End bp | 1542597 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642657775 |
Product | protein of unknown function DUF558 |
Protein accession | YP_001931653 |
Protein GI | 188997402 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTAC CGAGATTTAT AGGAGAAAAA GAAGGTGATT ACTTAGTTTT AAAAGACCAA GAATACAATC ATGCTGTTAA AGTTTTAAGA ATTAAACAAA ACGATTTAAT AGAAATCAAT ACATTAGATG GGAATGTTTA TCTTGCTAAG GTGGAGGATG TTACTAAAAA TCAGCTTATA GCCCTGCCAA TAGAAAAAAT CCCCGTTAAA GAAGAAGAAT TTAAAATAAC GTTATATCAA TGTATGCCAA ACCAACTTTC AAAGATAGAT GAAATTATAG AGCCATTGTC ACAGCTTGGA GTTTACAAAC TAATCCCTGT AATATCCAAA AACTCAGCAG TAAAAGAGCA AGACGTAACC AAAAAACTTG AAAAATGGCA AAGAATAGCC CTTAACTCAA TAAAACAGTG TAAAAGACCA TTTCCATTGA TTATTGAAAA ACCTATAAAA CTATATAATA TTAAATGTAA TGATGATTTA AAAGTTGTAT TTTATGAAAA AGAGCAGCAA AATAAAGTTA AAATGCTTAT GAATAATAAT TTCAAAACTG CGTCAGTTTT TATAGGAAAT GAAGGCGGAT TTAAAGAAGA GGAGATTGAA TATCTTAAAA AAGAAGGTTT TATTCCATTA TCCTTAGGAG ACTACATTTT AAAAATGGAA ACTGCTATAA TAATTGGAAT ATGTCAAATT AAGTGTATTT TAGAAAATTA A
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Protein sequence | MSLPRFIGEK EGDYLVLKDQ EYNHAVKVLR IKQNDLIEIN TLDGNVYLAK VEDVTKNQLI ALPIEKIPVK EEEFKITLYQ CMPNQLSKID EIIEPLSQLG VYKLIPVISK NSAVKEQDVT KKLEKWQRIA LNSIKQCKRP FPLIIEKPIK LYNIKCNDDL KVVFYEKEQQ NKVKMLMNNN FKTASVFIGN EGGFKEEEIE YLKKEGFIPL SLGDYILKME TAIIIGICQI KCILEN
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