| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1490 |
|---|
| Symbol | |
|---|
| ID | 6332286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1536264 |
|---|
| End bp | 1537121 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642657768 |
|---|
| Product | 4-hydroxybenzoate polyprenyltransferase |
|---|
| Protein accession | YP_001931646 |
|---|
| Protein GI | 188997395 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00000512063 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAAATA AAATTAAAAC CTATTTAGAG TTAGTAAAGT TTTCCCATAC AATCTTTGCC
ATTCCTTTTG GGTTATCAGC GGTATTTATA ATAGAAAAAG GATTTCCATC TTGGGAAAAG
ATATTTTGGA TTTTAGTAGC TTTAGTTTCT GCAAGAACCG CCGGAATGGC TTTTAACAGA
TTTGTTGATA GACCAATAGA TGCCAAGAAC CCAAGGACAA AGAACTGGCC ATCCGCAAAA
GGTGAAGTTA GACCAAACGA GATAATGGCT CTTGGACTTA TATCATCAAT TATATTTATA
TTTTCTGCTT ATAAATTAAA CATGCTTGCA TTTTGGTTGT CTCCAATGGT GATTTTACTT
TTATTATTGT ATCCTGCCGG GAAAAGATTT ACTTATTACG TTCATCTTAT TCTTGGGTTA
GTTTATTTTT TAATCCCGAT TGCTGTTTCC ATAGCTTTAA GAGGCAGTAT TGAAATATCT
GCAATATTTC TTGGTATAGG TATGGCTTTT TGGGTAGCAG GTTTTGATAT TCTTTATGCT
TTACAAGATT ATGAGTTTGA CAAATCTTTT GGACTTTACT CTATCCCTGT AAAATATGGT
ATTAAAAATG CAATATTAAT ATCAAGAACT TTCCATTTTA TAACATTCAT TTGTCTGATT
TTAACAGGAT TTTTTGCAAA TTTATCGTAC ATATATTTTG CAGGATTATT TATTTTGAGT
GGATTTTTGG TCTATGAGCA TTTACTTATA AAAGAAAATG ATTTGTCAAA GATAAATAAA
GCTTTTTTCA CAGTTAATGG TTTTATTAGT ATAATATTTA GCATAATCGT TTTATTAGAT
GTCTTTATCG GAGGTTGA
|
|---|
| Protein sequence | MINKIKTYLE LVKFSHTIFA IPFGLSAVFI IEKGFPSWEK IFWILVALVS ARTAGMAFNR
FVDRPIDAKN PRTKNWPSAK GEVRPNEIMA LGLISSIIFI FSAYKLNMLA FWLSPMVILL
LLLYPAGKRF TYYVHLILGL VYFLIPIAVS IALRGSIEIS AIFLGIGMAF WVAGFDILYA
LQDYEFDKSF GLYSIPVKYG IKNAILISRT FHFITFICLI LTGFFANLSY IYFAGLFILS
GFLVYEHLLI KENDLSKINK AFFTVNGFIS IIFSIIVLLD VFIGG
|
|---|
| |