| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1477 |
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| Symbol | |
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| ID | 6331232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1524413 |
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| End bp | 1525648 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 642657754 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001931633 |
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| Protein GI | 188997382 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000124607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTG AATTTTCAGA AGAAAAAATT GATACTATAT TTGTTAGGCT ACTAAAATAT
GCAGAGAAAA ATTTTAAATC TGCAATATGT AAAGAAACAT TTTTAAAAAT TAAATACTTG
GTAAAAGATG TACTGAGAAA TAAAAATAAA ATTTCAGAAT TCCAGCAATT AGGCTGTGAC
CTTTTTAAAT TAGGAATTAT TTTTAATGAA GCTATATCAA TTTTTGATTT TTTGAGAAAA
AACTTTATAG CACACCTACC AAACGCTATC GATTTAAGAG AAGCAAAAAG AATTGAAAGG
TTATACGAAG AAATGGAAAA TCATTTGGCA ATAGGGTATT TAAAAAATGA GGTAATTTTG
TTAAAGAATA GATTAGAATT TTTAGAAGAG TACATTATTT CCAAAGATAT CCATTTACTT
CTTGCAAACC CTTTTAAAGC TCATATTAAT TATTTCAAAG ATTTTTTAAA CTCCATTTTG
GATGGTGGAA TATTTAGTAA TATATCGCAT CAATCTTGTG CTTTTGGTAT ATGGTTAAAA
GAAAAAGGGA AAGAATACAT AGATGAAGAA CATATTTTAA AAGATTTGAA ACACTTGCAT
AAAGATTTTC ATAATCTAAT TGAAATTGCA GAAAGTTATA AGAAAAACAA AAAATTTAAG
GACCTTTACT TTATGATTTT AAATATTCAA AATATAATGA TTTGGATAGG AAACGAATTT
TTGTATTTAA ATACAAAATT CATAAAATTA GAAATGTCGA TAGACCCTTT AACAGGAGCT
TTTAATAGAA GAGGTTTTGA AATAATTATT CAAAAACTTT TAGAAATTTC CCAAATAACC
GATGCTCCCA TTACACTTGC CATGGCTGAT TTAGATTACT TTAAAAAAAT TAACGATACT
TTTGGTCATC TTGCTGGAGA TGAAGCTTTA AAACATTTTG TAAATATTAT AAAAAGAAAT
TTAAGAAAAT CTGATTATGT ATTTAGAATT GGTGGAGAAG AATTTTTAAT TTTACTTCCA
AATACAGAAT TAAAAGATGC TGTAGAAATT GTAGAAAGAA TTAGGAAAGA CCTTGAAGAA
AACTCGCTAC ATTACGATGG TAAAGAAATA AAAATAACTG CAAGCTTTGG CTTAGCTGAA
GTAGATAAAG AAAAATATAT TAATGAGATC ATAAAAAAAG CAGATGAAAA GCTCTATAAA
GCAAAAGAGT CCGGAAGAAA TAAGGTAGTA GTTTAA
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| Protein sequence | MEFEFSEEKI DTIFVRLLKY AEKNFKSAIC KETFLKIKYL VKDVLRNKNK ISEFQQLGCD
LFKLGIIFNE AISIFDFLRK NFIAHLPNAI DLREAKRIER LYEEMENHLA IGYLKNEVIL
LKNRLEFLEE YIISKDIHLL LANPFKAHIN YFKDFLNSIL DGGIFSNISH QSCAFGIWLK
EKGKEYIDEE HILKDLKHLH KDFHNLIEIA ESYKKNKKFK DLYFMILNIQ NIMIWIGNEF
LYLNTKFIKL EMSIDPLTGA FNRRGFEIII QKLLEISQIT DAPITLAMAD LDYFKKINDT
FGHLAGDEAL KHFVNIIKRN LRKSDYVFRI GGEEFLILLP NTELKDAVEI VERIRKDLEE
NSLHYDGKEI KITASFGLAE VDKEKYINEI IKKADEKLYK AKESGRNKVV V
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