| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1463 |
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| Symbol | |
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| ID | 6331601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1510046 |
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| End bp | 1511035 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642657740 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001931619 |
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| Protein GI | 188997368 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000951693 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTTG CAAGCGAAGC TTACCACCTA TTAAACAAAG CTATTTATCA TTACGAAAAT
GAAAATTTTG AGATGGCAAT TACTTTATTA GACGAAGCTA TTTTGTTAGA CCCAGAAATT
CCAGAGGTTC ATTATTGGAG AGGTAAAGTT GCAACCCATG ACCTAAACCA AGAAAGTTTG
GAAGTTGCAA TTGTTGAACT ATCAGAAGCA ATTAGATTAA AACCAGATTA TGCAGATGCC
TATTTTGAAA GAGGTAGAGT CTATATACAA AAAGGAGAGT TTGAAGAGGC CAAAAAAGAT
TTAGAAAAAG CAATCCAGTT AAATCCAAAA CTAAAAGAAG CGTATTCTCT TCTTGCACAG
ATAGAGCTTA TATCTGGAAA TGATGAGAAA GCAATGAAAT ATCTTGAAAA AGTTTCTCAT
CAAGAAGGGG ATGATAGATA CTATTACTCT CTTGGTAAAA TCTTTTATAA CGCCGGTAAA
TATCAGCCAG CTATTGAACA ATTTAATAGG ACTATAGAAA AAAATAAGTA TTTCGTGGAT
GCTTATGTTT ATAAAGCTCA TGCCTTGGCA AATATTGGAA ATTATCAAGA AGCAATAGAA
AATTTGAAAA AGGCAATAAT TTTAGTTCCA GAAGAGATTA GTTATTTTAT TGATATGGCA
AAATACTATT TTGAGATAGG AAAGCAAAAA GCTAAGGAAG GTAATAATAT TGAAGCAGCA
GAGAATTTTA TAAAAGGTCT ACAGATTGAT TACAATCTCA AAATAGAAAA AGAATACATT
CCGGTTATCA TGAAAGCTGT TAAAGAACTT TTAGAAAATA AAAATTATAA AGAAGCCTTA
GAATTGATAG ACCAATTAGA GCTTATTGTA AAAGAGTTAG AGTATGCAGA ATTTAAAGAA
GATTTTGATA AACTAAAAAA AGAAGTAATG AAATCTTTAC CATTGAAGGA GAAAATTGTA
AAGTTTGTGA TGGATATATA CACTAAATAA
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| Protein sequence | MSVASEAYHL LNKAIYHYEN ENFEMAITLL DEAILLDPEI PEVHYWRGKV ATHDLNQESL
EVAIVELSEA IRLKPDYADA YFERGRVYIQ KGEFEEAKKD LEKAIQLNPK LKEAYSLLAQ
IELISGNDEK AMKYLEKVSH QEGDDRYYYS LGKIFYNAGK YQPAIEQFNR TIEKNKYFVD
AYVYKAHALA NIGNYQEAIE NLKKAIILVP EEISYFIDMA KYYFEIGKQK AKEGNNIEAA
ENFIKGLQID YNLKIEKEYI PVIMKAVKEL LENKNYKEAL ELIDQLELIV KELEYAEFKE
DFDKLKKEVM KSLPLKEKIV KFVMDIYTK
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