| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1443 |
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| Symbol | |
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| ID | 6332406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1487326 |
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| End bp | 1489737 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642657720 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_001931599 |
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| Protein GI | 188997348 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000111055 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG TCTATGAGAG ATTAATACCG GCTACAAAAC CAGAATACAA AGAATTTGAA
TTTAATTCTC AAAAAATCAA CAACCTTATA AAAGAAAACA GCATAAAACT TTACAGCCAT
CAAGCCGAAG CTTTAGAGCA GATACTAAAA GGAAATGACA TAATCGTTAC TACACCTACA
GCTTCAGGAA AATCTTTAAT CTATACTTTA TCAATCTTAG AAAAAATAGA CCAAAACCCG
GACACAACGG CCATTTTAAT TTTTCCCCTT GTTGCCCTTG CAAGAGACCA AAAAGAAAAA
ATAGAAAACC TTATAAAAAT GACAAAAATC AAAGCAACTG TTGAAACATA CTATGGAGAC
ACTTCAAATA CTGAAAGAGC AAGAATTAGG TCAAACCCGC CAAACTTTTT AATCACAACT
CCGGATATGT TAAATCAGGG AATTTTGCCA AATCATTGGA GCTGGGATAA ATTTTTTACA
AATTTAGAGT TTGTCGTTGT TGACGAAATT CACGCCTACA GAGGAGTGCT TGGGTCTCAT
GTTGCAAACA TTTTTAGAAG ATTAAACAGA TTAGCTAATT TTTACACAGG TAAAGAGCCT
TTATACATCT GCAACTCTGC AACCATTAGA AACCCAAGCC TTTTTGCAGA AAAACTTACA
GGAAAGAAAA ATTTTATAGA AATATCAAAA TCTGGAGCAC CATCTCCAAA AAAATTAATA
TACATCGCAG AGCCAGCTTC TAACTATCAA CTTATAGAGA TTATAATAGA ATTTCTAAAA
ACAGGAACAT CAACGATAGT TTTTATAGAC AGCAGAAAAG ATATAGAAGT TATTTATCTA
AACATAAGAA AAGAGCTTAT AAAAAGAAAG CTTTTTCAAC TTATAAATAA AGTAAAACCT
TACAGGTCTG GATACAGACA GGAAGAAAGG AGAGAAATAG AAAAAGGCTT AGCTAATGGA
GATATAACAG TTGTACTTTC TACAAGTGCG TTAGAAATGG GTATAGATAT TGGAGAGATT
CAGTGCGTTG TTTTAAAAGG TTTTCCTGGG ACGCTGGCTG CTATGTGGCA ACGCTTTGGA
AGAGCCGGCA GAAGAGGCCA AACAGCATAC AACTACCTAA TCACAAAACA AGATGCCTTA
GACCAATATT ATCTTAAAAA TCCTGAAGAT ATTTTCAACA GAAACGTAGA AGAGCCAATC
ATCAATCCTG AAAATAAATA CATTCTTAAA AAACATCTAA TATTATCAGC TAAAGAACTT
CCTATTCATA TTCGGGATAT AGAGCCATCA GAAAAAGAAG CGGTAAAAGA GCTTTTAGAA
GATAAAATTC TTTATATTGA TAAAGATAAA ATCAAATCAA GAAAAAAAAT CTCTTTTAGC
ATCAGGTCTG CAGGAGATAG TTATGATATA GTAGACATAA AGACCAATCG TTCTATTGGA
AATCTTAATC AAGAGTATGT ATTTTATGAA GCTTTTCCAA ACGCAGTTTA TATTCATTCC
GGAGAAACTT ATAAAGTTGT TAGCGTAGAT AATGATGATA AGGTGGTGTA TGTTGAAGAA
GCAGATTTAA ATTACTTTAC ACAACCGGTG CTGTCTTCAG AGACAGAAAT ACAAAGCATC
GAAAAATCAA GAAAATTTAA AGATATAGAG ATCTTTTATG GAAGCGTTAA TGTTAGGTCT
ATGATAATAG GATACTCAAA AATAGAGATA GAATCTAATA AAAGAATCAA CAATGTTATG
TTTGATGATG AAAAAATTTT AGAAAGAAAT TTTGCTACAA AAGCAGTATG GTTTACCATT
CCGGATTATT ATGAAAGTTT GATAAAAAAG AATACATTAG AAAACAGTCA GAAAACAGTT
TTATCTTTGC TTGAAAGAAA GCTTGAAAAA CCAGTCTATG AGATGGTTTT AAACATAGTT
TCAAATAGTA AAACTCCATA CAAAAAACTT GGAGAAATTT TAAAAGAGAA TGATTCTAAT
TTTATAAAAA ATTATTTAAA AAACCTATCC AAAACAGAGA TTGAGATTTT GACGACAGAA
GCTGAAAGAT TACTGAACGA GAAAAATATT TTCATAGGTG CTTTACATGG AGCTGAGCAT
GGAATGATTG GTATTTATTC CATCTTTGCC ATGAATGACA GATGGGATAT TGGCGGATTG
TCTACAAACT ACCATCCACA GACAGAAAAA GCAAGTATAT TTATTTATGA TGGCTACGAA
GGCGGGATAG GCTACGCAGA AGCGGGTTTT GAAAGATTGG AAGATATTTT AAAAGCAACT
TACAAAAACA TTAAAAACTG TAAATGTTTA AATGGTTGTC CGTCTTGTAT ATTATCTCCA
AAGTGTGGAA ACGCAAACGA ACATCTTGAT AAACTGGCTA CAGAAAAATT TTTAGAATTA
ATCTTAGCAT GA
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| Protein sequence | MKKVYERLIP ATKPEYKEFE FNSQKINNLI KENSIKLYSH QAEALEQILK GNDIIVTTPT
ASGKSLIYTL SILEKIDQNP DTTAILIFPL VALARDQKEK IENLIKMTKI KATVETYYGD
TSNTERARIR SNPPNFLITT PDMLNQGILP NHWSWDKFFT NLEFVVVDEI HAYRGVLGSH
VANIFRRLNR LANFYTGKEP LYICNSATIR NPSLFAEKLT GKKNFIEISK SGAPSPKKLI
YIAEPASNYQ LIEIIIEFLK TGTSTIVFID SRKDIEVIYL NIRKELIKRK LFQLINKVKP
YRSGYRQEER REIEKGLANG DITVVLSTSA LEMGIDIGEI QCVVLKGFPG TLAAMWQRFG
RAGRRGQTAY NYLITKQDAL DQYYLKNPED IFNRNVEEPI INPENKYILK KHLILSAKEL
PIHIRDIEPS EKEAVKELLE DKILYIDKDK IKSRKKISFS IRSAGDSYDI VDIKTNRSIG
NLNQEYVFYE AFPNAVYIHS GETYKVVSVD NDDKVVYVEE ADLNYFTQPV LSSETEIQSI
EKSRKFKDIE IFYGSVNVRS MIIGYSKIEI ESNKRINNVM FDDEKILERN FATKAVWFTI
PDYYESLIKK NTLENSQKTV LSLLERKLEK PVYEMVLNIV SNSKTPYKKL GEILKENDSN
FIKNYLKNLS KTEIEILTTE AERLLNEKNI FIGALHGAEH GMIGIYSIFA MNDRWDIGGL
STNYHPQTEK ASIFIYDGYE GGIGYAEAGF ERLEDILKAT YKNIKNCKCL NGCPSCILSP
KCGNANEHLD KLATEKFLEL ILA
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