| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1440 |
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| Symbol | |
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| ID | 6331194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1482412 |
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| End bp | 1485657 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642657717 |
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| Product | RAP domain protein |
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| Protein accession | YP_001931596 |
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| Protein GI | 188997345 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.112962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATA AACAATATAT CTTAGATTAC ATTGGATATT TAAAAGAGTT AAGCAGAAAA
ATCGGTGTTA GAGTTGATTT CGGAAATCTT GCTAAATCTA AACCAAGAAA TAAAAATAAA
AATCTTGAAA ATATTTTTTT CTACTTTGAT GAAAACTTAA GTTTAGGAGA AACTTATAAA
GTTAATCAAG AAGCAGATGA AAAACTGTAT TGGTTTTTGA GGCAAAAGCT TAAAGAGATT
GACGGTTTAA ATCAAGCAAT ATTTTTAGGT ATCGGATTAT TTAAATATGT AATAAAAGAT
AACGGAAGTT ATACAAATAA AGCTTTTGGA CCTATTTTTA TAACTAATTT GGAAATAGAA
GTAGATGATG AGGATAGGAG TATATATATT CATATTGGAG ATCCATTTAT AAACTATGAC
CTTTTTAATA ACTTATCTGA AAATTTAGAA GATAATGAAA ACTCTATCCA ATTAGAACAA
GCAGTAACTT TTATAAAAAG CATAGAAGAC AAACTTGAAG AATCGCATGA TTTATTTGAT
TTAAAAACCC TTGCAAAGGA TGTTATTTTA GAAATTCCTA AAAAATTTAA CCTTATGATA
GACCAAAGCA TTAAAATAGA AAGAGAAAAT ATAGGAGAAA TACTTGATAA AAAAGAAAGC
TTTTATTTAG ATAGAAATTA TTTTTTTGTC AACACCTTTC CTTCTGAACT ATCAACTTAC
AAATCTTTAG AATTGTTAAT TCAAGAAATA AATGAAGAAG GAGATTTTAA AAACAGTACA
TTAAAGAAAC TTTTTGTATC AGCCTTTGAA GAAAAGATAA ATTTAGATAA AGTTAACAAT
TTTAAACTTG AAGACTATGA ATATTTAATT CCTTTGCAAC TTTCGGAAAG TCAGAAAAAT
GCTATTGAAA ATGCAATAAA TTATGAAATT TCTTACATAC AAGGACCTCC GGGAACCGGT
AAAAGCCATA CAATAACTGC ATTAGCTTTG TTGTCCATTT TGCTTGATAA AAAAATTCTA
ATCGTTTCTC AGAAACCACC TGCCATTAAG GTTCTATTTG AAAAGCTAAC AGAAATTTTA
GAAAAAAATA ACATTATTCC ATTTATTTAT TACTATGATG AATACAAAAG AAGAATGAAA
GAAAATGTAG AAGCTGTTGA GAGATTAAAT ATAAAAGATG ATTTAAAAGA AAGATTAAGA
TACTTGGGAA AAAGAGCAAT AGATTACATT AGTGAGTTAA AAGAATTAGA GAAAAATTAT
AAAGAATATC TTGCATTGGA ACATAAATAT TACTCTATAA GAAAAGATTT AAATGATGAA
GTCAAATTTT TTGAGGAAGG ATTTTTTAAT ATCAAAAATT ATCTCAATCA CTTAAAATGG
ATAGAAATTG AAGAGCTAAA TCTTCATAAA AATACTTTTA AAGTATTAGA AAAATATGGA
AATACAAGAC TTTTGCAGTT AAGAAAAGTA TTTCTTTATA GATTTTTAAA AAACTATCAC
AAAGAGCTTG AGCTTAGGAA ATTCTTAAAT ATTAGCCAAT CTTTATTCTT AGATTCTTTG
ATAAAAATAA TTGACGATTA TAATAAAATT CAATATGCAA AAAGTAAGAT TATATCATTT
GGAGATATAC AAAATTTAGT CAATCGGATA AATCATATAA AAAGCCAGTT AATGCAAGTT
TCAAAAGAGA TGGTAAATTT AAAGCTATTA CTTAAGATTT ATGAAAATGC TCAAAAATAT
AAAAATGATT TAGCCAATTT TAAGAAGGTT TTTCATTGGG CAAAAGATCG TTTATTAAAG
AATGCTCAAG AAAAAGTTAA TTATGAAAAT ATATTGGAAA TTTTTAATAT TTGGATTGTA
GATATTCCAA ACGTAGACAG AATACTGCCT ATGAAGCCAA ATTTATTTGA TATCGTTGTA
GTTGATGAAT CCTCTCAGGT AAATTTAGCT CAGATAATTC CTGTATTTTA TAGAGGTAAG
CATATTTGTG TAGTTGGAGA CCATAAACAA CTAAGCCTTG AGGCTACAGG GTTAGGATTT
TCTATTAGTA AAAGATTAGA TAGGTATATT TGGGAAAAAT TTAGACCAAA TAACATGAGC
TACGACCAAG CAGAAAGCAG GAATTTAACA TTAACGAAAT CTTCTATTTT AGATTTTTTA
GTTTCTGATG GTTCTGATAA AAAATCAAAT AGAGAATCTT TTAGCTACAT AAGTGCAGAA
GCTCAGAGCA TGTTAAATGA ACATTTTAGG TCAGTTTTTT CTTTGGCAAG CTTTACATCA
AAGAAATTTT ACGAAAACAA GATCTACATA ATGACAAAAA ATCCGAATTT AGAAGACAAA
GCATTTAAAA GTGTCAAAGT CAATGGTAAA AGGCATTTAA AATTTAATGT TGTTGAAGAA
GAAATAAATG AAGTATTTAA AATTATTGAA AGTCTAAAAA CACACAGGAG ATATAAAGAA
GTTGTTTTAC CAGATTATGT TCCAGAAAAT TTTTCAATAG GGGTATTATC ATTTACAAGA
GACCAAGTGG ATAGTTTGAG AATTAGAAGC TATGAATATG GCTTTGAAGA TATACTAATA
GGAACGCCGG AAGAGTTTCA GGGTCATGAG AAAGATGTAA TGATTATATC ACTTGCTTTA
GATGAGACAT GTACAAGAAG TAAAAACCAT TATGAAAATA AAAATAGATT TAATGTTGCT
ACAAGTAGAG CAAAATATTT TACGTTTTTA GTTTATGGTG GAATTCCTGA AAACTTCCAT
TTGACTAAGG AATACATCAT ACACTTTGAA AGCATAGAAA ACATAGACAG AAAAGACATT
GATACAGAAA ATGCTTCCTT AGATAAATCT AAATTTGACT CGGAATTAGA AGAATTTGTT
TACAACTACT TAAAAGATAT AGTAAACGAA ATAAATAAAA ATTATGATGC AGATATAAGA
ATATATAACC AATATGAAAC CTGTGGCTAT AGGCTGGACT TTGTATTATA CAACAGAAAA
AATAAAAAGT TTATTGCATT AGAAGTTGAC GGACCATATC ATTATGAAAT GGCAGGTTTA
CAAAATATTA ATTATGCTGA TTGGCATATA GAAAGAGCAG AAAGGTTAAA AAGAGCTGGA
TGGAAAATAA TCCATACACC ATATTACAAA TGGTATATTA ACGGATGGTT AGATTCAAGT
AATCCTATTA TGAAGGAAGA ATTAGATAGA ATTAAAAGGG AGTTAAAAGA AAACCTAATT
CCCTAA
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| Protein sequence | MNDKQYILDY IGYLKELSRK IGVRVDFGNL AKSKPRNKNK NLENIFFYFD ENLSLGETYK
VNQEADEKLY WFLRQKLKEI DGLNQAIFLG IGLFKYVIKD NGSYTNKAFG PIFITNLEIE
VDDEDRSIYI HIGDPFINYD LFNNLSENLE DNENSIQLEQ AVTFIKSIED KLEESHDLFD
LKTLAKDVIL EIPKKFNLMI DQSIKIEREN IGEILDKKES FYLDRNYFFV NTFPSELSTY
KSLELLIQEI NEEGDFKNST LKKLFVSAFE EKINLDKVNN FKLEDYEYLI PLQLSESQKN
AIENAINYEI SYIQGPPGTG KSHTITALAL LSILLDKKIL IVSQKPPAIK VLFEKLTEIL
EKNNIIPFIY YYDEYKRRMK ENVEAVERLN IKDDLKERLR YLGKRAIDYI SELKELEKNY
KEYLALEHKY YSIRKDLNDE VKFFEEGFFN IKNYLNHLKW IEIEELNLHK NTFKVLEKYG
NTRLLQLRKV FLYRFLKNYH KELELRKFLN ISQSLFLDSL IKIIDDYNKI QYAKSKIISF
GDIQNLVNRI NHIKSQLMQV SKEMVNLKLL LKIYENAQKY KNDLANFKKV FHWAKDRLLK
NAQEKVNYEN ILEIFNIWIV DIPNVDRILP MKPNLFDIVV VDESSQVNLA QIIPVFYRGK
HICVVGDHKQ LSLEATGLGF SISKRLDRYI WEKFRPNNMS YDQAESRNLT LTKSSILDFL
VSDGSDKKSN RESFSYISAE AQSMLNEHFR SVFSLASFTS KKFYENKIYI MTKNPNLEDK
AFKSVKVNGK RHLKFNVVEE EINEVFKIIE SLKTHRRYKE VVLPDYVPEN FSIGVLSFTR
DQVDSLRIRS YEYGFEDILI GTPEEFQGHE KDVMIISLAL DETCTRSKNH YENKNRFNVA
TSRAKYFTFL VYGGIPENFH LTKEYIIHFE SIENIDRKDI DTENASLDKS KFDSELEEFV
YNYLKDIVNE INKNYDADIR IYNQYETCGY RLDFVLYNRK NKKFIALEVD GPYHYEMAGL
QNINYADWHI ERAERLKRAG WKIIHTPYYK WYINGWLDSS NPIMKEELDR IKRELKENLI
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