| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1429 |
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| Symbol | |
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| ID | 6331472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1469589 |
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| End bp | 1471595 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642657706 |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_001931585 |
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| Protein GI | 188997334 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000479067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTA TTATTAAAAT TGTAATTGTA GTATTAGCAT TATCTCTATT TAGTTGTACA
GAAACCTTAG AAATATCAAA AAATGCTGAG CGATATTTTT CTTCTGGTCA ATTAAATGAA
GCGATAAACG AATATAAAAA ACTTGGTGAT AATACTGCAG CGCTTTTTCT TATAGGTGTA
GCATATTATA TGCAAGATAG ATATCAAGAA TCCATTTCTT ATATGAACAA AGTTATTGAT
TTATGTTCGG AAGGTAAACC ATGCCCTTTG ACTGTTGATA TGATAGGATT TTGGTCTGGA
AAAGCACATT TGGCAATAAA AGATTATGAT AAAGCAATAC ATTTACTAGA GATCGCAGCA
AAAGAGTCAA AAGAAAATCC AAGTGAACCT CTTTGGCAAG GTTTCTATTC GAGATTTGTT
CCTAAAAAAA GTGAGGCTCT TTCATTGCTT GGCAGTGCTT ATTATTTGAA AGGAGAATAT
CAAAAAGCAG TTGAAGCTTT AAATGAATCA ATAAAATTAG ATCCCAATCT TTCCGATCCA
TTTTTCTTCC TTGCGATGTC CTATGGAAAA TTAAAAGAAT ATGGTAAGGC GGTTGAAGCT
GCAAAAAGAG CAATCGAGCT TGACCCTAAA GCCCCTACTT ATTATGCAGT TTTAGGCCTT
ATATATAAAG ACCAGAAGAA ATATAAAGAA GCTGAAGAGA ATCTTAAAAA GTCTATAGAA
TTAGATCCAA AGTCCATTGT TTCTTATCTA AAACTGGCAG ACCTCTATTA TGAAAAAGAA
TCTTATAAAG AAGCTGTAAA TACCCTTACA AAGGTATTAG AAATTAATCC ATCAAACATG
GAAGCTAATT ATTCGCTAAT ATATACCTAT ATGGCTATGG GACAATTTGA TAAGGCAATA
GAAAGTGCAA ACAAAGCAAT TAAACATAAT ACGATAACTG AAGCCGGCAT AAGGATAAAA
AAAGCAGAAG GAGATTACCC TGTTGTTGAA ATGGTATCTG AAGACAGTCC AGCAAAGATG
GCTGGTATAG AGATAGGAGA TAAAATCATC AGAGTTAATA ATCAATCAAC AGAGAAATTA
AAACTTGAAG ATGTAATTAA TCTATTGCGT GGTGAAGAAG GAACTCGGGT TACATTAATC
ATAAAAAGAG GTGATAAAGA ATTTGAAAAA ACAATTACAA GAAAAACAAT GATTGACAAA
ATAGTATCTG TATTTTTTGC CGAGAGGAGT CTTTGCTATA GAGAGAAAGG TAATCTTGAT
CAGGCTATGA AAGACGCAGA AAAGGCATAC TCATTTAATT TAAATTTAGA TAATATAAAA
GAAGCTCTTG GTGCTGTTTA TATTGATAAA GGAAAGTATG ATGAAGCCAT AAATATCCTT
TCTTCTACAG ATAAGGATAA TAATTTTTCC AAGTTATTGC TTGCAACAGC CTATGCCAAG
GCTGGTAAAT TTAATGAAGC TGTAAGTGTT TATAAGAATA TCCCTGAAGA TTATTTAATA
ACCAAATCAG TTTTAAGAAA TAATGCAATA AACACTCTTT ATAACGCATT AAAGCCTTAC
AAAGATAATT TGATGCAAAG CATTAAGGCT CTTGAAGCAA AAGGTCAATA TAAAGAGGCA
ATTAAAGAGT ATGCAAACCT TTTAAGGATA TCTGATGAGA AAGAAGCAAA AGAAATAAGA
ACTCATATTG CAGAACTTAT GATTAAATAT CCACATCTTT TTGCTTTACC AGAAGAAGCA
AGAAGATCTG TAATAAAAGC AGAAGCATTT ACAGAAGAAG GGAAATTTGA AAAAGCGATT
GAAGAATATC AAAAAGCTTT AGAATTATCA CCTTTTTATC CTAATCTTTA TAAGGCGCTG
GCATTAAGTT ATGGCCAGAT TAAAGACTAC AAAAAAGCAA TTAAGAATAT GAATATTTAC
CTTGAACTCT ACCCCGATGC TCCTGATATT AGGGCAGCCA AAGATCAGAT TTATAAATGG
GAATTTATGA TGGAAAAAGG AGAATAA
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| Protein sequence | MKSIIKIVIV VLALSLFSCT ETLEISKNAE RYFSSGQLNE AINEYKKLGD NTAALFLIGV
AYYMQDRYQE SISYMNKVID LCSEGKPCPL TVDMIGFWSG KAHLAIKDYD KAIHLLEIAA
KESKENPSEP LWQGFYSRFV PKKSEALSLL GSAYYLKGEY QKAVEALNES IKLDPNLSDP
FFFLAMSYGK LKEYGKAVEA AKRAIELDPK APTYYAVLGL IYKDQKKYKE AEENLKKSIE
LDPKSIVSYL KLADLYYEKE SYKEAVNTLT KVLEINPSNM EANYSLIYTY MAMGQFDKAI
ESANKAIKHN TITEAGIRIK KAEGDYPVVE MVSEDSPAKM AGIEIGDKII RVNNQSTEKL
KLEDVINLLR GEEGTRVTLI IKRGDKEFEK TITRKTMIDK IVSVFFAERS LCYREKGNLD
QAMKDAEKAY SFNLNLDNIK EALGAVYIDK GKYDEAINIL SSTDKDNNFS KLLLATAYAK
AGKFNEAVSV YKNIPEDYLI TKSVLRNNAI NTLYNALKPY KDNLMQSIKA LEAKGQYKEA
IKEYANLLRI SDEKEAKEIR THIAELMIKY PHLFALPEEA RRSVIKAEAF TEEGKFEKAI
EEYQKALELS PFYPNLYKAL ALSYGQIKDY KKAIKNMNIY LELYPDAPDI RAAKDQIYKW
EFMMEKGE
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