Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1425 |
Symbol | |
ID | 6331609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1464266 |
End bp | 1466062 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642657702 |
Product | hypothetical protein |
Protein accession | YP_001931581 |
Protein GI | 188997330 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000495219 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTAAAG TATATAAAGC TTTAATAGGA ATTTTTCTAA TATTTTTGTA TTTTTCCCCT GTAAATGCAT TAGAAAAGCC AGAAGTTTTT CTACCAGAAG AAAGTAGCAA ATTGCTTTTA GATGAATTTT CTTTTGTTTC AGGAAAGTTT ACAGATTACT TGATAGTTTA TTCACCTGAG AACAACGGAA TTTACTTTAT ATGGGATGTT ACGAGTACTT ATGTAGAGTC AATTCCTTCA GAGACATTAA AAAAAGATAA TAAGATTTTA GAAAATTTTT TATTTTATCT CAAGGGATTG AACTATACAA AAAAGAAATT TGATAATAAT TTAAACATAG ATATAAGTAA TGAACCTCAA CATTCTAAGG ATGGTAAATT AACTGCAAAA ATTATTCCAT ACCAAGGAAA ACAAATTATA AGCTTAGTAA GAACATCGGA CAATAAAGAA CTTGCAAAAC TTTTTATTTT TAAAAACAGA GAGTGGATAA TTCTTACACC AGCGGGTTAT TACAATGCAA GCGATTTTGC AGGAAAATAT CTGAACGTTA AAATTGGTGA TAAAGTTTAT AAAATGGATG ACTTTGAAAA AGTTTTCTAT CGTCCAGAAA TTGTTGAAGC AGCTCTTGAA GGAAAATCTA TATCAGAATT AAAGTTCCCG AATATAAAGT TGCCTGATAT TAAGAATGAA ACAAAATACA ACATGATTGT AACAGAAGTT TTGTCTAATT TTCCTTTCGA AAAAGCAGGT GGCAAAATTT GGGATATTAT TTATTCTTTA AATGGTAAGA CTTTTTATGA ATCAACTAAT AAAGATTTGG CAAAAGAATT TAGTGAATAT ATAAAAAGCT TACCAGCAGG TTCTTATGAA ATGACTCTCA TAAGAGAAGG AAGAAAAATT ACTACAACTA TAAATCTTTC TAATATATCA TCTACACCAA GGTTAGGAAT TACTATTTTA ACTATTGAAA ACAATCCTCA ATTTTATTTT TTAGAAGCTT TAAAAAATGT GTCATCAAGG GAAGACTTGA AAAATGTTGC ACAATTGCTT GAAATAGCCA AAGCATTATC TCCAGAATGG GCTGATATTT ATTATAACTT GGGATTAGTT TATGAGGAAC TAAGTTACTA CGATAAAGCT GCAGAGAATT TTTCTAAATA TGTAGATTTT GTAAAAGACA AGAATTCTGT AGAAGCTAAA AATATGACTT TTAGAATTGA GGAGAATAGA AAGAAATATG AGAAATTGGA ATATATAAAG AAAAGAATGG TAGAAGTAAT GGGAGAAAAG CAAGATTATG ATGAAGTTAT ATATTATAAG TATGGAAATA TAAGATTTAA ATACGACAAA TCAAATCAAA TAGTAATGAT AAATCCTGCT TTTATTGAAC AAGAATTTCT TAAAAAGAAT TTTGAAAGAA CATGGGTATG GTGGGATATA AATTCAAAAC GACTTCCTTT TTTCCCTGTT AAATTTGATG GCAAATATTT TGAAGTTAGA TATTTTGGTG TTTTTCCAGA CATAATGTCA AACAACCTGG AAATTTCTCT ATTTTTAATA AAGGGCGAAA TAAATATGGA TACTTCTACG GTCAAAATAT CAAAGTTTAG GCACGATATT TATGGATATA GTCGAGACAA TGTTGAAGAA GTATTTAGGC AAGCAAATAA TATGATATCA ACTTTCAAGT TTGATGAAAT TGAAGATTCT AAGTATGAGT TTTTAATAGG CACAGAAAAG CCTATAGAAA GGCATCTTAT ATGGCGTAAT CCGATAAAGG TTTATAAAAT TGAATAG
|
Protein sequence | MVKVYKALIG IFLIFLYFSP VNALEKPEVF LPEESSKLLL DEFSFVSGKF TDYLIVYSPE NNGIYFIWDV TSTYVESIPS ETLKKDNKIL ENFLFYLKGL NYTKKKFDNN LNIDISNEPQ HSKDGKLTAK IIPYQGKQII SLVRTSDNKE LAKLFIFKNR EWIILTPAGY YNASDFAGKY LNVKIGDKVY KMDDFEKVFY RPEIVEAALE GKSISELKFP NIKLPDIKNE TKYNMIVTEV LSNFPFEKAG GKIWDIIYSL NGKTFYESTN KDLAKEFSEY IKSLPAGSYE MTLIREGRKI TTTINLSNIS STPRLGITIL TIENNPQFYF LEALKNVSSR EDLKNVAQLL EIAKALSPEW ADIYYNLGLV YEELSYYDKA AENFSKYVDF VKDKNSVEAK NMTFRIEENR KKYEKLEYIK KRMVEVMGEK QDYDEVIYYK YGNIRFKYDK SNQIVMINPA FIEQEFLKKN FERTWVWWDI NSKRLPFFPV KFDGKYFEVR YFGVFPDIMS NNLEISLFLI KGEINMDTST VKISKFRHDI YGYSRDNVEE VFRQANNMIS TFKFDEIEDS KYEFLIGTEK PIERHLIWRN PIKVYKIE
|
| |