| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1417 |
|---|
| Symbol | |
|---|
| ID | 6332454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1457431 |
|---|
| End bp | 1458636 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642657694 |
|---|
| Product | proteinase inhibitor I4 serpin |
|---|
| Protein accession | YP_001931573 |
|---|
| Protein GI | 188997322 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4826] Serine protease inhibitor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000100118 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT TAGTTAACAT ACTTTTAATG GTCTTAGTAA TATTCTTTTG TAATGTAGCT
ATGGCAGATA CAGACAAGGA TTTAAAAGTT GTATCACAGG GCATAAACAA GTTTAGTTTT
GATTTGTATA AAAAACTAAA AGATAAAAAT AAAGAAGAGA ACCTCTTTTA TTCACCTGCT
AGTATATCAA TTGCTCTTGC AATGACCTAT GCTGGAGCAA GGGGGAATAC GGAAAAGCAG
ATGGCTAATG TATTAAACTT TACTCTTCCA CAAGATCGTC TTCATCCAGC TTACTCTAAG
CTAATTGAAA ATTTAAAATC TAATAAGGAT TATGAACTCA ATATTGCTAA TGCTTTATGG
TTGCAAAAGG ATTATAAGTA TCTTCAGGAA TTTTTAAATA CAATGGAAAA ATATTATAAA
GGTGGATTTA ACGAAGCAGA TTATATAACA AATCCTGAAG GTGCACGAAT AAAAATTAAT
GATTGGGTTT CAAGAGAAAC AAAAGAAAAG ATTAAAGATA TATTAAATCC AAAAGATATA
ACAAGCCTTA CAAGATTAGT GCTTACAAAT GCTATTTATT TTAAAGGAAA GTGGCAAACA
GAATTTAATA AGATGGCTAC GAGAGATGAA GATTTTTATT TAATAAACGG GCAAAAAACT
AAGGTTAAAA TGATGTACCA AAAAAACACA TTCAATTATT ACGAAAACGA TGATCTTCAA
TTATTGGAGA TATCTTATAA AGGTAATAAA ATTTCAATGG TTATAATCTT ACCAAAAGTA
GGAAAGTTTA AAACAGTTGA AAATATGATG GATGAAAAGA AATTACAAGA GTGGTTGAAA
AATGCTACGG AAACGAAAGT TGAAGCATAT ATTCCAAGAT TTAAATTTAC ACAAAGATTT
GACTTGAGTA AAAATTTATC TGATATGGGC ATGAAAGATG CTTTTGACGA AGTTGAAGCT
GACTTTTCAG GAATTAATGG TGAAAAGAAT GATCTTTATA TAAGTAAAGT TATTCACAAA
GCATTTGTAG AGGTGAATGA AGAGGGAACA GAAGCTGCAG CAGCTACTGC TGTAGTATTA
GACACAAAAG CATTAATTGA AGAACCCGTA TTTAAAGCAG ATCATCCTTT TATCTTTTTG
ATTCGTGATA AAGAGACGGG GTCTATTTTG TTTATGGGAA GAGTTATGGA TCCCAATAAG
GAATAG
|
|---|
| Protein sequence | MKKLVNILLM VLVIFFCNVA MADTDKDLKV VSQGINKFSF DLYKKLKDKN KEENLFYSPA
SISIALAMTY AGARGNTEKQ MANVLNFTLP QDRLHPAYSK LIENLKSNKD YELNIANALW
LQKDYKYLQE FLNTMEKYYK GGFNEADYIT NPEGARIKIN DWVSRETKEK IKDILNPKDI
TSLTRLVLTN AIYFKGKWQT EFNKMATRDE DFYLINGQKT KVKMMYQKNT FNYYENDDLQ
LLEISYKGNK ISMVIILPKV GKFKTVENMM DEKKLQEWLK NATETKVEAY IPRFKFTQRF
DLSKNLSDMG MKDAFDEVEA DFSGINGEKN DLYISKVIHK AFVEVNEEGT EAAAATAVVL
DTKALIEEPV FKADHPFIFL IRDKETGSIL FMGRVMDPNK E
|
|---|
| |