Gene SYO3AOP1_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1412 
Symbol 
ID6331568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1453887 
End bp1454648 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content32% 
IMG OID642657689 
ProductIntegrase catalytic region 
Protein accessionYP_001931568 
Protein GI188997317 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000825692 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACTTAT TGATTAGAAA AACTCTAATC GATAACAGTG AAAGTGTCCA AGCTAAAACC 
CAAAAAAATC CTTCACTATC ACTAAACAGA CAGCTTGAAC TACTAAGCAT ATCAAAAATA
GCTTATTATT ACACTAAAAA AGAACCATTT TCAAGTGAAA AAGACAAAAT TCTATTAGAT
GCGATAGATA AAATCTATAC AGAACATCCA TATTATGGTG CCAGAAGAAT GCAGAAAGCA
TTAGAAAGCA TAGGAATAAA AGTAGGAAAG AGAAAGTTAA GTAGAATTTA TAAGCTTATG
GGTATAAGGG CATTATATCC ACCACCAAAA ACAACCATTT TAAACGAAGA AAACAAGAAA
TATCCATATT TATTAAACCA GACAACTGCA ACACAAAAAC CAAACCAAAT ATGGAGCGGT
GATATAACCT ACATTAAATT AGAGAAAGGC TATGCATACA TAGAAGGCTC AATAGACTGG
CATAGCAAGA AAGTATTAAG CTGGAAGCTA AGCAATACGA TGGGTAGCTA TTTAACAACC
AGCATTTTAG AAGAGGCAAT AGAGAAATAC GGAAAGCCAG AAATATTCAA TTCAGATCAA
GGAAGCCAGT ACACATTAAA AGAACACATA GAAAAATTAA AGAAAAACGG TATAAAAATA
TCAATGAATG CAAAGGGTAA GAGTATAGAC AATATAGTAA TAGAGAGATT TTGGAGGACA
TTGAAATATG AGAATTTATA TCTAAAGGCT ATAGCACTGT AA
 
Protein sequence
MDLLIRKTLI DNSESVQAKT QKNPSLSLNR QLELLSISKI AYYYTKKEPF SSEKDKILLD 
AIDKIYTEHP YYGARRMQKA LESIGIKVGK RKLSRIYKLM GIRALYPPPK TTILNEENKK
YPYLLNQTTA TQKPNQIWSG DITYIKLEKG YAYIEGSIDW HSKKVLSWKL SNTMGSYLTT
SILEEAIEKY GKPEIFNSDQ GSQYTLKEHI EKLKKNGIKI SMNAKGKSID NIVIERFWRT
LKYENLYLKA IAL