| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1398 |
|---|
| Symbol | |
|---|
| ID | 6332656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 1440904 |
|---|
| End bp | 1441884 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 642657680 |
|---|
| Product | protein containing nucleotide-diphospho-sugar transferase domain |
|---|
| Protein accession | YP_001931559 |
|---|
| Protein GI | 188997308 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000000735856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAT TTGGAAAACC TATATTATTT GTAGTTTTTA ATAGATTAGA TACTACTAAA
AAAGTTTTTG AGCAAATAAA AAAGGTAAAA CCGATAAAAT TATATGTTGC TTCTGATGGT
CCAAGAAATG AAGCTGAGAA AGAAAAGGTT ATGCAAGTTA GGAATTTTAT TATAAATAAT
GTGGATTGGA GATGTGATAT AAAGACAAGA TTTAGAGATA AAAACTTGGG AGTTGGTTTT
GGTCCAAATG ACGCTATTGA TTGGTTTTTT TCGCATGAAG AAGAAGGAAT AATACTTGAA
CATGATTGTT TGCCATCGAT TAGTTTTTTC CACTTTTGTA GTGAACTATT AGATAAATAT
AGAAATAACA AAAAAATTGC TGTTATTCAA GGCTTTAATC CATTTCCCAA AAAAGATTAT
CCTTATAGTT ATTTTTTCTC TAAATATGAT TTAAAATGGG GATGGGCTAC ATGGAGAGAT
AGGTGGCAGT ATCAAGATAT GTATACAAAG GATTGGCCAC ATATTAAGAA AACTGATTTT
TTAGATATGA TAACAAAAGA TAATGTAGTA AAATTATTTT GGATTACTAT TTTTGATCAA
ATTCATAGAA ATCCCAACCT TACTTGGGAT ACCCAATTTA CTTATCAACT TTTCAAAAAA
AATCTGTTAA CGATAACCCC TAAACAAAAT CTTATTCTAA ATATTGGCTA TGGTAAAGAC
GCGATATATA CAACATGGGT TCCAGCACAT TTAAAGGGAC TTAAATTGGA AGAATTAGAT
TTTCCGTTAG TCCATCCTGA GGATATTAAA ATAAATGAAG AATATGATAG ATTAATTGAA
AAAGTACAAT TTAATATAAA TCATTTATCA GTTTTAAGAC GTAAGTTCAG GAATTTTCTT
GAGTCAAATA AATTTTTGAG AGATAATTTT CTTCCTTTGT TTTTATTTTT ATATAGATCT
TATAAAAAGT TTAAAGGTTA G
|
|---|
| Protein sequence | MNQFGKPILF VVFNRLDTTK KVFEQIKKVK PIKLYVASDG PRNEAEKEKV MQVRNFIINN
VDWRCDIKTR FRDKNLGVGF GPNDAIDWFF SHEEEGIILE HDCLPSISFF HFCSELLDKY
RNNKKIAVIQ GFNPFPKKDY PYSYFFSKYD LKWGWATWRD RWQYQDMYTK DWPHIKKTDF
LDMITKDNVV KLFWITIFDQ IHRNPNLTWD TQFTYQLFKK NLLTITPKQN LILNIGYGKD
AIYTTWVPAH LKGLKLEELD FPLVHPEDIK INEEYDRLIE KVQFNINHLS VLRRKFRNFL
ESNKFLRDNF LPLFLFLYRS YKKFKG
|
|---|
| |