Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1378 |
Symbol | |
ID | 6331686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1415902 |
End bp | 1417464 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642657660 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_001931539 |
Protein GI | 188997288 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA AGCCTATCTA TGAAACAATT ACAAACTTAG AAAGAGGATT AATCACTTTT ATAGTTATGA CCGGAGCCTT TATGGCTATC TTGGATACAA CCATCGTTGA CATTGTCGTT CCAAAGATGA TGGGACCACT TCAAACAGAC CTTTACGGTA TTCAGTGGGT AATAACAGCC TACATGATAG CTTCAGCTGT AATGTTAATT TTATCAGAGT GGCTTGATAA AGTCATAGGT CTTAGAAAGG TATTTATAGC CGGAATCGTG ATATTTACAC TTTCATCTTA TATGTGTGGA GTAGCACAAT CATTAGATTG GATGATATCG TCAAGAATCA CGCAAGGTAT CGGCGAAGCT TTGATTATGG CAACAGCACA AACGATTTTA TTTTCTGTCT ATCCGGAAGA AAAAAAAGGA TTAGCAATGG GGATATTTGG GCTTGGTGTT AGCTTTGCAC CGGCACTTGG ACCAACTCTT GGGGGATACA TTACAGAGTA TTTAAATTGG AGATGGGTGT TTTTTATCAA CCTTCCAGTA GGAATTTTAA CAACTATCCT TGCAATTTTT TATCTTCCAG AAACAAGCAT GATAAGAGAA AAGGCAAAGC TAAATTTTAT ATCCTATTTT TTCTTATCTG TTTTTACAAT AGCTTTATTA ATATTGCTTT CAAAAGGACA ACAGCTTGGT TGGTTCATGT CTGATGCTAT AGTATATCTA ACGATAATTT CAGGGTTTGC ATTACTGTTT TACATTCTTT CAGAACTCCT ATCAAAAGAG CCATTGATAG ATTTTAGAAT TTTTTTAATC AAAGAATACT TTGTCGGTTT TATGGTATTT TTCTTACTTC TTGGATTTTC AATGTATCAG ATTTTTTACC TTCTTCCGCT TTACTATGAA AACTTAAAAG GACTTCCAAC CTTTGAGGCA GGACTTCATA TACTTGCCTT TGCGTTTTTT ATAGCTTTAT TCTCTCCCGT TGCCGGCATT TTGTCTGATA AGTGGAATGA AAAGTATGTT TTATACATAG CAACAGTTTT ATACTTGATT ACATCTATCT TTATAATTCC AAAGTTAGAT TACTACACAC CAACAGTTAA AGCTGCAATA ATGACCATTC CTCTTGGCAT TTCTATGGGA ATGTTTTTTG CACCGGTTAC AACCTTAGCA CTTAGAAAGC TTGGACCAAA AACATCCCTC GGTACAGGAC TTATGCATTA TGGAAGGTTT GTAGGTGGTT CATTTGGAAC CGCTATAGCT ACAAATGACT TATACAAGCA CCAATGGGAG CATTTTGAAG GGATAAATGC AATGCAAAAT TACAATTACA TAAGTCAGTT TATTGATAAA ATCAAAGAAA ATATGGTAGC AGTTCCGGAA AACGTAGCAG AGCTAAAAGC CAAGGCTTTA TTTTATGGCG TCGAATATCT TCACAGTCTA AACTTTTCAT TTCAAGATAC ATTTTTTATT GCCGGACTAT TTGGCTTACT TGGAGCTTTA CCTGTTATTT ATATGTGGAT TTCCGGTTTG ATTGGTTTTA ATTCTAACAA TACATATGAT TAA
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Protein sequence | MENKPIYETI TNLERGLITF IVMTGAFMAI LDTTIVDIVV PKMMGPLQTD LYGIQWVITA YMIASAVMLI LSEWLDKVIG LRKVFIAGIV IFTLSSYMCG VAQSLDWMIS SRITQGIGEA LIMATAQTIL FSVYPEEKKG LAMGIFGLGV SFAPALGPTL GGYITEYLNW RWVFFINLPV GILTTILAIF YLPETSMIRE KAKLNFISYF FLSVFTIALL ILLSKGQQLG WFMSDAIVYL TIISGFALLF YILSELLSKE PLIDFRIFLI KEYFVGFMVF FLLLGFSMYQ IFYLLPLYYE NLKGLPTFEA GLHILAFAFF IALFSPVAGI LSDKWNEKYV LYIATVLYLI TSIFIIPKLD YYTPTVKAAI MTIPLGISMG MFFAPVTTLA LRKLGPKTSL GTGLMHYGRF VGGSFGTAIA TNDLYKHQWE HFEGINAMQN YNYISQFIDK IKENMVAVPE NVAELKAKAL FYGVEYLHSL NFSFQDTFFI AGLFGLLGAL PVIYMWISGL IGFNSNNTYD
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