Gene SYO3AOP1_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1378 
Symbol 
ID6331686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1415902 
End bp1417464 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content35% 
IMG OID642657660 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_001931539 
Protein GI188997288 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA AGCCTATCTA TGAAACAATT ACAAACTTAG AAAGAGGATT AATCACTTTT 
ATAGTTATGA CCGGAGCCTT TATGGCTATC TTGGATACAA CCATCGTTGA CATTGTCGTT
CCAAAGATGA TGGGACCACT TCAAACAGAC CTTTACGGTA TTCAGTGGGT AATAACAGCC
TACATGATAG CTTCAGCTGT AATGTTAATT TTATCAGAGT GGCTTGATAA AGTCATAGGT
CTTAGAAAGG TATTTATAGC CGGAATCGTG ATATTTACAC TTTCATCTTA TATGTGTGGA
GTAGCACAAT CATTAGATTG GATGATATCG TCAAGAATCA CGCAAGGTAT CGGCGAAGCT
TTGATTATGG CAACAGCACA AACGATTTTA TTTTCTGTCT ATCCGGAAGA AAAAAAAGGA
TTAGCAATGG GGATATTTGG GCTTGGTGTT AGCTTTGCAC CGGCACTTGG ACCAACTCTT
GGGGGATACA TTACAGAGTA TTTAAATTGG AGATGGGTGT TTTTTATCAA CCTTCCAGTA
GGAATTTTAA CAACTATCCT TGCAATTTTT TATCTTCCAG AAACAAGCAT GATAAGAGAA
AAGGCAAAGC TAAATTTTAT ATCCTATTTT TTCTTATCTG TTTTTACAAT AGCTTTATTA
ATATTGCTTT CAAAAGGACA ACAGCTTGGT TGGTTCATGT CTGATGCTAT AGTATATCTA
ACGATAATTT CAGGGTTTGC ATTACTGTTT TACATTCTTT CAGAACTCCT ATCAAAAGAG
CCATTGATAG ATTTTAGAAT TTTTTTAATC AAAGAATACT TTGTCGGTTT TATGGTATTT
TTCTTACTTC TTGGATTTTC AATGTATCAG ATTTTTTACC TTCTTCCGCT TTACTATGAA
AACTTAAAAG GACTTCCAAC CTTTGAGGCA GGACTTCATA TACTTGCCTT TGCGTTTTTT
ATAGCTTTAT TCTCTCCCGT TGCCGGCATT TTGTCTGATA AGTGGAATGA AAAGTATGTT
TTATACATAG CAACAGTTTT ATACTTGATT ACATCTATCT TTATAATTCC AAAGTTAGAT
TACTACACAC CAACAGTTAA AGCTGCAATA ATGACCATTC CTCTTGGCAT TTCTATGGGA
ATGTTTTTTG CACCGGTTAC AACCTTAGCA CTTAGAAAGC TTGGACCAAA AACATCCCTC
GGTACAGGAC TTATGCATTA TGGAAGGTTT GTAGGTGGTT CATTTGGAAC CGCTATAGCT
ACAAATGACT TATACAAGCA CCAATGGGAG CATTTTGAAG GGATAAATGC AATGCAAAAT
TACAATTACA TAAGTCAGTT TATTGATAAA ATCAAAGAAA ATATGGTAGC AGTTCCGGAA
AACGTAGCAG AGCTAAAAGC CAAGGCTTTA TTTTATGGCG TCGAATATCT TCACAGTCTA
AACTTTTCAT TTCAAGATAC ATTTTTTATT GCCGGACTAT TTGGCTTACT TGGAGCTTTA
CCTGTTATTT ATATGTGGAT TTCCGGTTTG ATTGGTTTTA ATTCTAACAA TACATATGAT
TAA
 
Protein sequence
MENKPIYETI TNLERGLITF IVMTGAFMAI LDTTIVDIVV PKMMGPLQTD LYGIQWVITA 
YMIASAVMLI LSEWLDKVIG LRKVFIAGIV IFTLSSYMCG VAQSLDWMIS SRITQGIGEA
LIMATAQTIL FSVYPEEKKG LAMGIFGLGV SFAPALGPTL GGYITEYLNW RWVFFINLPV
GILTTILAIF YLPETSMIRE KAKLNFISYF FLSVFTIALL ILLSKGQQLG WFMSDAIVYL
TIISGFALLF YILSELLSKE PLIDFRIFLI KEYFVGFMVF FLLLGFSMYQ IFYLLPLYYE
NLKGLPTFEA GLHILAFAFF IALFSPVAGI LSDKWNEKYV LYIATVLYLI TSIFIIPKLD
YYTPTVKAAI MTIPLGISMG MFFAPVTTLA LRKLGPKTSL GTGLMHYGRF VGGSFGTAIA
TNDLYKHQWE HFEGINAMQN YNYISQFIDK IKENMVAVPE NVAELKAKAL FYGVEYLHSL
NFSFQDTFFI AGLFGLLGAL PVIYMWISGL IGFNSNNTYD