| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1374 |
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| Symbol | |
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| ID | 6332076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1411039 |
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| End bp | 1413327 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642657656 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_001931535 |
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| Protein GI | 188997284 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00034181 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAA CCATTCACGG CTATCCAAAA ATTGGACCAA ACAGGGAGTT AAAAAAAGTT
GTAGAAGCTT ACTGGAAAGG TCAAGTATCA AAAGATGAGC TTATCTCAAA GGCATCAGAA
ATAAATCTTA GTAGAGTTAA AAAGGCTATT GATAACGGTG TTGATATTAT TCCATCTAAT
GATTTTTCTC TCTATGACTT TGTTCTTGAT ACAGCAACTA TGTTTAATGT AATCCCGGAA
AGATTTAAGT ATATAGAAGA CTCTCTTGAT AGATACTTTG CAATGGCAAG AGGAACAGAT
AAAGCTATTG CCTGCGAAAT GACAAAATGG TTTGATACAA ACTATCACTA CATAGTTCCG
GAGCTTGCAG GAGATATTAA GCTTGTTAAA AACAGACCCC TTAAATCATA CAGATATGTA
AAAGAAGCAC TTGGAATTAA AACTAAGCCT GTTTTGGTAG GACCATTTAC TTTTGTTTAC
CTTTCAAAAG TCTATGAAAG ACAAGAAGGC TCAATCTTAA TGAAAATGGT TAAAGCAAGC
GAAAGCAGTA AATTTGCAGG ATACTTAGAC CTTTTTACAT CTTTATACAA CCAAGTTTTA
AAAGAGCTTG AAAATGAAGG CGTTGAATAC GTTCAGTTAG ACGAGCCAGC ATTTGTTTTA
GATTTATCTG ATGAAGAAGT TGGACTAGCA TTAAAAGCGT ATGAAAAAGT AATGGACGAA
ATCAAAAACT TAAAAGTAAT TGTTAACACT TATTATGAAA GCCTTTCAAG CTATGATAAG
CTTGTAAACT TACCGGTTCA TGGAATTGGT CTTGATTTTG TAGTAAACAA TGAAAACTTA
GAAAACATTA GAAAATATGG ATTTCCGGCA GATAAAATAT TGGTTGCTGG CGTTGTATCC
GGAAGAGACC CATGGAAGAC AAATTTGAAA GAAACTGCAA ACTTAATTAA AGAATTATCA
AACTATATAA AACCAGAAAA CATTATCTTG TCTAATGCAG CACCATTATT CCATTTACCA
GTTAGTTTAG AGCCGGAGAA AGGACATTTA TCACAAGACC TTATAAATAT TCTTGCTTTT
GCTGACGAAA GATTGGCAGA GCTAAAATCA TTGAGAGACC ACTTTGCAAA CGGCGTTGAT
CTACCAGACA CAGATGTTAA ATCTATCATA TCTAAATACA ATAACGAAGC AGTAAGACAA
ACAGTTGCGC AAATAAGAAA TGCAGAAGTT GGAAGAAAAA CTCCATTTGA AGAAAGATAT
AAAAAGCAAA TGGAATTATT AAAACTTCCT TTACTTCCAA CAACAACAAT CGGAAGCTTT
CCACAAACAC AAGAAGTTAG AAAGTACAGA GCAGACTACA AAGCCGGAAG AATTTCCCAG
GAAGAGTACG AAAACTTTAT TAAAAAACAG ATTGAGTATG TTATAAAAGT TCAGGAAGAG
TTAGACTTAG ACGTTTTAGT TCATGGTGAG TTTGAAAGAA CAGATATGGT TGAATTCTTT
GGCGAGAAGT TGGAAGGTTT TGCATTTACT AAAAACGGCT GGGTTCAATC ATATGGTACA
AGATGTGTAA GACCACCTAT TATTTACGGT GATGTTTCAA GACCAAATCC AATGACATTA
AAAGAAACAG TTTATGCACA AAGCTTAACT GACAGACCGG TAAAAGGTAT GCTTACAGGA
CCTGTTACAA TTCTAAACTG GTCTTTCTAC AGAAAAGACA TTCCAAAAGA AGAAGTAGCT
TATCAAATAG CAATAGCCTT AAGAGAAGAA GTTTTAGACC TTGAAAAAGC CGGCATAAAA
ATCATTCAAA TAGACGAACC GGCATTTAGA GAAGGATTGC CGCTCAAAAA ATCTAAACAA
GAAGCTTACT TAAACTGGGC AGTAAAAGCG TTTAAGCTTA GCCATGATAC GGTTAAAGAT
GAGATCCAAA TCCATACTCA TATGTGTTAT TCAGAATTCA ATGAAATTAT TGAGTACATC
CACAAAATGG ATGCTGATGT TATCTCTATT GAAGCATCAA GAAGTAAAGG AGAAATCTTA
GAAGCGTTTG AAAGATTTAA CTACGACCAT GGAATTGGTA TAGGAGTTTA CGATATACAC
TCTCCAAGAA TTCCAAGAGA AGAAGAAATA GAAGAAATTT TAAGAAGGTC ATTAAAATAC
ATTAGAAAAG ACCTTATCTG GGTAAATCCA GACTGTGGTT TAAAAACAAG AGGATGGGAA
GAGACAATAC CATCATTAAG AAATATGGTA AACGTAGCTA AAAGATTAAG AAAAGAACTT
TCTCAGTAA
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| Protein sequence | MKTTIHGYPK IGPNRELKKV VEAYWKGQVS KDELISKASE INLSRVKKAI DNGVDIIPSN
DFSLYDFVLD TATMFNVIPE RFKYIEDSLD RYFAMARGTD KAIACEMTKW FDTNYHYIVP
ELAGDIKLVK NRPLKSYRYV KEALGIKTKP VLVGPFTFVY LSKVYERQEG SILMKMVKAS
ESSKFAGYLD LFTSLYNQVL KELENEGVEY VQLDEPAFVL DLSDEEVGLA LKAYEKVMDE
IKNLKVIVNT YYESLSSYDK LVNLPVHGIG LDFVVNNENL ENIRKYGFPA DKILVAGVVS
GRDPWKTNLK ETANLIKELS NYIKPENIIL SNAAPLFHLP VSLEPEKGHL SQDLINILAF
ADERLAELKS LRDHFANGVD LPDTDVKSII SKYNNEAVRQ TVAQIRNAEV GRKTPFEERY
KKQMELLKLP LLPTTTIGSF PQTQEVRKYR ADYKAGRISQ EEYENFIKKQ IEYVIKVQEE
LDLDVLVHGE FERTDMVEFF GEKLEGFAFT KNGWVQSYGT RCVRPPIIYG DVSRPNPMTL
KETVYAQSLT DRPVKGMLTG PVTILNWSFY RKDIPKEEVA YQIAIALREE VLDLEKAGIK
IIQIDEPAFR EGLPLKKSKQ EAYLNWAVKA FKLSHDTVKD EIQIHTHMCY SEFNEIIEYI
HKMDADVISI EASRSKGEIL EAFERFNYDH GIGIGVYDIH SPRIPREEEI EEILRRSLKY
IRKDLIWVNP DCGLKTRGWE ETIPSLRNMV NVAKRLRKEL SQ
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