Gene SYO3AOP1_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1367 
Symbol 
ID6332616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1402729 
End bp1404234 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content30% 
IMG OID642657649 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_001931528 
Protein GI188997277 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTTACG AAGCTTTTTC AAGAAAATAT AGACCAAAAT CTTTTCAAGA AGTGATAGGT 
CAGGAGCATG TTGTTAAGAC TTTAAAAAAT GCTGTAAAGC TTGATAGAGT ATCACATGCT
TACATCTTTT CTGGACCAAG AGGCGTTGGA AAAACAACCA TAGCAAGAAT CCTTTCAAAA
GTCTTAAACT GTAAAAATCC GGTAGATTAT GAATCTTGCA ATCAGTGTGA AAACTGTATT
GAAATAGATA AAGGCTCTTT TCCGGACATG TATGAAATTG ACGCAGCATC TAACAGAGGT
ATAGATGATA TAAGAATGAT TCGTGATAAC GTTGGATACC AGCCAATAAA AGGAAAATAC
AAAGTATATA TAATAGATGA AGCACATATG CTTACAAAAG AAGCATTCAA CGCCCTTTTA
AAAACCTTAG AAGAACCACC ACCAAGAAAC ATTTTTATCT TAGCAACAAC AGAACTTTAC
AAAATACCTG AAACCATAAA ATCAAGATGT CAAACATTTA TATTTAAGCC ACCAACAAAA
GAGCAGATAA AAAACTATCT TTTGAGAATA TTAAACAATG AAAAAATTCC ATATGAAGAA
GATGCGGTAG AGTTATTAGC CCAAGAGCTT GAAGGTGGTA TGAGAGATTC GGCAAGTCTT
TTAGACCAAG CAGTAACTTA TGCAGAAGGA AAGCTTACAA GAAAAGATGT AGAAGAAATT
CTCGGAATAG TTCCATACAG CTATGTACAA AAGTTTTTAA GAAATATTAA AGACTTAAAA
GTTGATGAAA ACATAAAATT AATTGATACA CTTGAAGACG AAGGATATGA TATAAACGTA
TTTTGGAAAC AGCTTTTAGA AGCCATTCAC AAAACACTTA TAGACTTAGC ACTTGATAAA
GAAGATGAAA TTTTTTCAAA AGAAGATTTA AAATCTCTTA TTTATTTAAA AACCATTTTC
ACAAAAACAT ATTCAGAGGC AAGAACATTT TTTGACCCAA AACAGATTTA TCATCTAACA
ATTTTAAAAA CGTTGTATTT AGACAGCATT AAAAGAATAG AGCAGCTTTT TGCTGAAGGC
GTTCAAGTTG TCCCTAAAAA AGAACCTGAA GTATTAAAAC AAGAAATCAA ACCACAAGAA
AAACAAGAAA CTAAACAACA AGAAGAAATA AAGCCAAAAG AAGAGCAAAA ACAGGATTTA
AACAAAATCA TTAGTCAGAT TATAAAAAAT GAAAAAGTCA TAGCAGTAAT AATTAAAAAC
GCAGAAATTA AAGAAGATGA AAACGCAGTT TACATAAAAG TTAAATCAAA AAGCGAAGAA
GACATTTTAA GAGACAATAT GAGTATTTTA ACTAAATACT TCAGTAAAGA AATATTTATA
TCGTCTCCGG AAGAAAAAAA AAGTAAAGTT AAAGAATCTA AAAAAGACGA GGCAGTAGAA
AAGGTTTTAG AGCTTTTCCC CGGTTCAAAA ATAATCACTT ACAAAAAGGA GGATGATAAT
GTTTAA
 
Protein sequence
MAYEAFSRKY RPKSFQEVIG QEHVVKTLKN AVKLDRVSHA YIFSGPRGVG KTTIARILSK 
VLNCKNPVDY ESCNQCENCI EIDKGSFPDM YEIDAASNRG IDDIRMIRDN VGYQPIKGKY
KVYIIDEAHM LTKEAFNALL KTLEEPPPRN IFILATTELY KIPETIKSRC QTFIFKPPTK
EQIKNYLLRI LNNEKIPYEE DAVELLAQEL EGGMRDSASL LDQAVTYAEG KLTRKDVEEI
LGIVPYSYVQ KFLRNIKDLK VDENIKLIDT LEDEGYDINV FWKQLLEAIH KTLIDLALDK
EDEIFSKEDL KSLIYLKTIF TKTYSEARTF FDPKQIYHLT ILKTLYLDSI KRIEQLFAEG
VQVVPKKEPE VLKQEIKPQE KQETKQQEEI KPKEEQKQDL NKIISQIIKN EKVIAVIIKN
AEIKEDENAV YIKVKSKSEE DILRDNMSIL TKYFSKEIFI SSPEEKKSKV KESKKDEAVE
KVLELFPGSK IITYKKEDDN V