| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1356 |
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| Symbol | prfB |
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| ID | 6331132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1392019 |
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| End bp | 1393128 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642657639 |
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| Product | peptide chain release factor 2 |
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| Protein accession | YP_001931518 |
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| Protein GI | 188997267 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0131185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGTAG AAGAAATAAA GACTAAATGG GAAGAGATAA AAGAGAAGTG GGATAATTTA
AAAGAGATTT TAAAGCCAGA AAAGTTAGAA GAAGAGATAA AACAACTTGA TGATTTAATG
GCAGACCCTA ACTTTTGGAA CGATACGAAA AAAGCTCAAG AAATTTCATC AAGGAGAAAC
TATTTAGGAG AAAAATTAGA AGAAATTTTA ACAGTTGATA AAAAAGTCAA TAATCTTTTA
GACTATATCA CACTTCTTGA AATGGAAGAA GACCAAGAGC TTTATAACGA AGTTGAAAAA
GAATTAAAAG AGATAGAAAA AGAAATCAGC AGATTAGAGC TTGGCAGTCT GTTATCGGAT
GAGATGGATT CAAAAAATGC AATTCTTACT GTTCAGGCTG GCTCAGGTGG AGTTGAGGCT
TGCGACTGGA CAGAGATGCT ACTTAGAATG TACACAAGAT GGGCAGAAAA GAGAGGTTAT
CAAGTTGAGC TTGTAGACTT TCAGCCGGAT GATGTAGCAG GCGTTAAAAG TGCAACGCTG
ATTATAAAAG GACCTTATGC TTATGGGTAT TTAAAGGGAG AACAAGGAGT TCATAGACTT
GTAAGAATTT CTCCATTTGA TGCAAACAAA AGAAGACATA CATCCTTTTC AGCTGTTTCA
GTAATTCCAG AAATTGATGA AGATATAAAA GTAGAAATAA ACGAAGAAGA CCTTAGAATA
GATACATACA GAGCAAGCGG TGCGGGTGGT CAGCATGTAA ACAAAACAGA TTCAGCTGTT
AGAATTACAC ATATTCCAAC CGGTATTGTA GTTGCTTGTC AGAGTGAAAG GTCTCAGCTT
CAAAACAAAC TTAAAGCTAC GAATATGCTT AAAGCAAAGC TTTATCAGTT AGAGCTTGAA
AAAAGAAAAG AAAAACAAAA AGAGCTTGAA GGCGAGAAAA AAGACATCAC ATGGGGAAGT
CAGATAAGGT CTTATGTTTT CCAGCCATAT CAAATGGTCA AAGATTTAAG AACAGGATTT
GAGACTGGAA ATATAGAAGC CGTAATGGAT GGAGAAATAG ACGACTTTAT AGAAAGCTAT
CTAAAATGGA AAGCAAAAGG CGGACAGTAA
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| Protein sequence | MIVEEIKTKW EEIKEKWDNL KEILKPEKLE EEIKQLDDLM ADPNFWNDTK KAQEISSRRN
YLGEKLEEIL TVDKKVNNLL DYITLLEMEE DQELYNEVEK ELKEIEKEIS RLELGSLLSD
EMDSKNAILT VQAGSGGVEA CDWTEMLLRM YTRWAEKRGY QVELVDFQPD DVAGVKSATL
IIKGPYAYGY LKGEQGVHRL VRISPFDANK RRHTSFSAVS VIPEIDEDIK VEINEEDLRI
DTYRASGAGG QHVNKTDSAV RITHIPTGIV VACQSERSQL QNKLKATNML KAKLYQLELE
KRKEKQKELE GEKKDITWGS QIRSYVFQPY QMVKDLRTGF ETGNIEAVMD GEIDDFIESY
LKWKAKGGQ
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