| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1322 |
|---|
| Symbol | trpC |
|---|
| ID | 6332674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1359538 |
|---|
| End bp | 1360320 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642657606 |
|---|
| Product | indole-3-glycerol-phosphate synthase |
|---|
| Protein accession | YP_001931486 |
|---|
| Protein GI | 188997235 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAT TAGACAAGAT TATTCAGACA AAAAGAGAAG AGCTTGAAAA TTACACTTCT
CAGTATTTAA AACATTTAGA AAAACTGGCA ATAGAAAGAA ATAAAAAAGT CTTAAACTTT
AAAAAAGCCA TTTCCGGAAA GAGTATCAAT ATTATTGCAG AAGTTAAAAA AGCTTCTCCG
TCTAAAGGAA TAATCAGACA TTATTTTGAC CCTGTTGATA TAGCAAAATC TTATGAAAAA
AATGGAGCAA AAGCAATTTC TGTACTAACA GATAAACAGT ATTTTCAAGG AGATATTGCG
TATCTTTATC AAATTTCAAC AGAAGTAAAT ATTCCATTGC TTAGAAAAGA CTTTATCATA
GATGAAAGGC AGATTTTGGA AGCTTATGCA TATGGTGCTG ATAGTTATCT ATTAATAGCA
AAAGTCTTGG ATAAAGAAAG TTTAAAGAGA CTTATAGATT TTGGAAGAGA GCTTGACATG
GAGCCATTGG TAGAAGTTCA CAGTAGAGAA GAAGGTGAAA AATCTGTAGA AGCAGGAGCA
AGAATTATTG GAATAAATAA TAGAAATTTG GAAGATTTTA CAGTTGATAT AAATCTATCA
AAAGAGCTTG CACCGTATCT AAAAGAGATC GGATCTGAAG TTGTAGTTGC AGAAAGCGGA
TTAGAGAGCA GACAACAGCT GCTTGAGTTG AAAAATTATC AAGTTGACGC ATTTTTAATA
GGAGAATCTT TAATGAAAGA AGCAGATGTA GGAAAGAAGT TAAGAGAGTT TATAGAAGGG
TAA
|
|---|
| Protein sequence | MNILDKIIQT KREELENYTS QYLKHLEKLA IERNKKVLNF KKAISGKSIN IIAEVKKASP
SKGIIRHYFD PVDIAKSYEK NGAKAISVLT DKQYFQGDIA YLYQISTEVN IPLLRKDFII
DERQILEAYA YGADSYLLIA KVLDKESLKR LIDFGRELDM EPLVEVHSRE EGEKSVEAGA
RIIGINNRNL EDFTVDINLS KELAPYLKEI GSEVVVAESG LESRQQLLEL KNYQVDAFLI
GESLMKEADV GKKLREFIEG
|
|---|
| |