Gene SYO3AOP1_1285 details

Gene Information

• Locus tag: SYO3AOP1_1285
• Symbol: ribH
• ID: 6331881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurihydrogenibium sp. YO3AOP1
• Kingdom: Bacteria
• Replicon accession: NC_010730
• Strand: +
• Start bp: 1327535
• End bp: 1327999
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 642657570
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: YP_001931450
• Protein GI: 188997199
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00000128176
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATTG TAGAAGGCAA ACTATCAGCT GAAGGTTTAA AGTTTGGTAT TGTAGTCGGC 
AGGTTTAATA GCTTTATCAC TGAAAGATTG TTGGAGGGAG CTATTGACTG TATTTTAAGA 
CATGGTGGCA GTAAAGAGAA TATAGAAATT GTAAAAGTTC CTGGTTCTTT TGAAATTCCG 
TTAACAGCTA AAAAACTTGC AAAGTCTGGT AAGTATGATG CTGTTATATG CTTAGGTGCG 
GTTATTAGAG GTTCTACACC ACACTTTGAT TATGTAGCCA ATGAAGTAAC AAAAGGAATA 
GCACAAGTTA GTTTAGAGAC AGAAGTGCCA ATAGGCTATG GAATTTTGAC AACAGACACA 
ATAGAGCAAG CAGTTGAGAG AGCTGGAACA AAAATGGGAA ATAAAGGATT TGACGCAGCC 
ATGGTTGCAA TAGAAATGGC AAATGTTTTA AAAAGTATAG GATGA 

 

Protein sequence

MNIVEGKLSA EGLKFGIVVG RFNSFITERL LEGAIDCILR HGGSKENIEI VKVPGSFEIP 
LTAKKLAKSG KYDAVICLGA VIRGSTPHFD YVANEVTKGI AQVSLETEVP IGYGILTTDT 
IEQAVERAGT KMGNKGFDAA MVAIEMANVL KSIG