Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1280 |
Symbol | |
ID | 6332105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1323781 |
End bp | 1324209 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642657565 |
Product | transcriptional regulator, BadM/Rrf2 family |
Protein accession | YP_001931445 |
Protein GI | 188997194 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000000116939 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTATCAG AATCTGTTAA AGATTGTATA AGAGCTTTAA TCTATCTTGC TATAAATCAA GAGAAAAACT ATGTTTCCGT AAAAGAAATA GCTGAAAAAT TAAATCTTCC TTTTCATTAT TTGGCAAAAA ACGTTCAAAA ACTTGTGAAA TCTGGAATTC TTGAATCTTA TAGAGGTCCA AAGGGTGGTA TAGTTTTTAA ACAGCCAATA GAAAGCATAA AAATAATAGA TATTATTAAA TCATTAGATG ATGATAGGTT ATTCAAATCT TGTATTTTAG GGTTTGAAGA ATGTAGTGAT GAAAATCCAT GTGCCATTCA TAATAGATGG GTTGTTGAAA GAAATCATTT GTATAATCTT TTTAATACAT CTCTTAAAGA TATAGTGGAA GATATAAAAC AAGGGAAAAT TAGCAACGTA AAATTATGA
|
Protein sequence | MLSESVKDCI RALIYLAINQ EKNYVSVKEI AEKLNLPFHY LAKNVQKLVK SGILESYRGP KGGIVFKQPI ESIKIIDIIK SLDDDRLFKS CILGFEECSD ENPCAIHNRW VVERNHLYNL FNTSLKDIVE DIKQGKISNV KL
|
| |