Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1265 |
Symbol | |
ID | 6331878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1309842 |
End bp | 1310381 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642657550 |
Product | Acireductone dioxygenase ARD |
Protein accession | YP_001931430 |
Protein GI | 188997179 |
COG category | [S] Function unknown |
COG ID | [COG1791] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGAT TAGTTTTCAG AAAAAACGGT AAGGTAATAG AAAATCCCGA AGAGATAAAA TCATTTTTGT CTCAGTATGG TGTAGTTTAT GACGTTTGGG GCGTTGATAG ACTTCCGGAA GATGTTAGAA AAAATTACGA CATAGATGAA GAAAACTCAA AAGCCATAAT CCAAGCATAC GAAAAAGAAT TAAAAGAATT GAAAGAAAAA ATGGGATACA TTACAGAAGA TATAGTTGTT TTATCTGAAA AAACTCCAAA TCTTGATGGT CTAATGGCTA AATTTAAAAG AGAGCATCAC CATATAGATG ATGAAGTTAG ATTTGTAGTT GATGGTAGTG GTATATTTCC GGTAAAAATA GAAGATGATA TTGTAGATAT TCATGTAGAA GCTGGGGAGT TAATCGTTGT GCCGGCGGGA GCAAGACACT GGTTTGAGCT TGACGAAAAC AGAAAAATAA AATGTATAAG AGTTTTCAAA ACACCTGCAG GTTGGGAAGC TATTTACAAT GAAAATGAAA CAGCAACTAT GAGGGACTAA
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Protein sequence | MARLVFRKNG KVIENPEEIK SFLSQYGVVY DVWGVDRLPE DVRKNYDIDE ENSKAIIQAY EKELKELKEK MGYITEDIVV LSEKTPNLDG LMAKFKREHH HIDDEVRFVV DGSGIFPVKI EDDIVDIHVE AGELIVVPAG ARHWFELDEN RKIKCIRVFK TPAGWEAIYN ENETATMRD
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