| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1222 |
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| Symbol | |
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| ID | 6332508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1272570 |
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| End bp | 1273610 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 642657506 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001931387 |
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| Protein GI | 188997136 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000000327641 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTGAAA GATTAAAGTC TTTTGTAAGT AATCATAACT TACAGGTATA TAAACTTTCT
GGTGATGAAT TCGCAATCTT GGTGGACAGG TATTTTCCGC AAAACGCTTT TGAAATGTTT
ATTAATGGAT TAATCTATTA TATAGAATCA AATCCAATAG AGATTAATGG TTATTCAATA
AAAATAGATA TAACCTTAGG AATTGCTGAT AGTACAGAAG GAAATTATAA AAATCTTCTT
GAAAAAGCAG ACATGGCTTT GAAATATGCA AAGCAACAAA AAAAGCCTTA CATGTTTTAT
AGAGAAGATT TAAATATTCA AAAGAAATAT CAGGAAAATA GATACTGGTT GAATGTACTA
AAAGATGCTA TAAATCAAGA TAACTTAATA GTATATTATC AAGGAATATT TAATAACCAA
ACAAACAAAA TCGAAAAATA TGAAAGTTTA ATCAGACTAA AATTAGAAGA TAAAATCATT
TCTCCTTTTT TCTTTTTGGA AGTTGCAAAA AAATCTAAAC TTTATCCAGA AATAACTAAA
AAAGTTTTTT CTGAAATTAT TAAGTATGCA AAAGACCATG AAATTTCCAT AAACATTTCG
GTAATGGATA TTTTAAATGA GGATATTGTT TCGCATATAC TTAATACATT AAAAAATAAT
AATTTAAAAA TAACTTTTGA AATTTTAGAA TCTGAAGGAA TAGAAAACTA TGCAGAAGTT
TCTCAATTTA TAAAAAATGT TAAAGAGTAT GGTTGCAAAA TAGCAATAGA TGACTTTGGT
TCAGGATATT CTAATTTTGC ACATATTTTA AACTTAGATG TTGACTATCT AAAAATTGAC
GCATCATTAA TAAAAAATTT AGATACAGAT AAAAACTCTC AAATAGTTGT TGAAACGATC
GTTGGTTTTG CAAAAAAACT TGGTATTAAA ACTATTGCTG AATTTGTTCA TTCAAAAGAA
GTTTTTGATA AAGTTGTAGA AATGGGAATA GATTATTCAC AAGGATATTA TATATCTGAA
CCAAAACCAA ATATATCTTA A
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| Protein sequence | MAERLKSFVS NHNLQVYKLS GDEFAILVDR YFPQNAFEMF INGLIYYIES NPIEINGYSI
KIDITLGIAD STEGNYKNLL EKADMALKYA KQQKKPYMFY REDLNIQKKY QENRYWLNVL
KDAINQDNLI VYYQGIFNNQ TNKIEKYESL IRLKLEDKII SPFFFLEVAK KSKLYPEITK
KVFSEIIKYA KDHEISINIS VMDILNEDIV SHILNTLKNN NLKITFEILE SEGIENYAEV
SQFIKNVKEY GCKIAIDDFG SGYSNFAHIL NLDVDYLKID ASLIKNLDTD KNSQIVVETI
VGFAKKLGIK TIAEFVHSKE VFDKVVEMGI DYSQGYYISE PKPNIS
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