| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1213 |
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| Symbol | |
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| ID | 6332559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1264108 |
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| End bp | 1265601 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657497 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_001931378 |
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| Protein GI | 188997127 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAC TAAAAGAGAT ATTAACAGAT GAAAAAATAA TTTATGGAAA TCAAGAGACA
GTTATAGAAG GAATTACAAA TAACAGCAAA AAAGTCGAGA AGAATTACGC ATTTTTTGCC
ATTAAAGGCA CATCGGTAGA TGGTCATAAC TTTATTGACG AAGCTATAAA AAATGGTGCA
TCTGTAATTT TTATAGAAGA TGAAAAGTAT GTTGAAAGTT TAAAAGGAAA AAATATAACT
GTTGTTTTGA CAGATAACGG CAGAAAGTCT TTAGCTTTGG CTTCAAACAG GTTTTATGAT
AATCCATCTG AAAAGTTAAA AGTGATAGCA ATTACTGGAA CAAATGGAAA GACTACAACA
TCAAACTTAC TTGCCCAGTA TTATGAAATG GCCGGGTATA AAGTTGGTGT AATCGGGACA
ATCAATTACA GAGTTGGAGA TGAGATATTA TCTTCAGGAC ATACAACGCC AGACCCAGTA
GAATGGTTTA AAACACTTAA AGTAATGAAA GATAAAGGGG CGGATGTAGT AGTTGCAGAA
GTTTCTTCCC ATGCAGCAGA CCAGTATAGA GTTTATTCAA CAAAGTTTCA TGGTGGAATT
TTTACGAATC TAACACAAGA CCATCTTGAT TATCACCAAA CAATGGAAAA TTACTTCTTA
GCAAAAAGAA GAATTTTTGA GCAGATTGAT GAATTCAATA AAGAAGCAAT TTACAGCATA
AATGTAGATG ATGAGTATGG AAGAAGAATC TTAGATTATC TAAAAAACCA TTTAAAAGTC
AATGATGACA AAATCATTAC ATACGGAAAA ACATCAGAAG ATTTTAAGAT TCTTGATTAT
AGACTTTCAC TTTTTGAGAC TGAATTTAGC TATAAATATA AAGATACATT AAGCAAAATC
AAAACAAAAT TGAGAGGGGT TTTTAATATT TATAATCTAT CTGCTGCCGT TTCTTTTCTT
ATAAAAGATG GTTTTGATTT GAAATTCTTA GAAGAAAAAG CATTACATCT AAAGCCGATT
AAAGGAAGGT TTGAAGTAAT AGAAGGGCAA GGTTTTATAG TTGTTATAGA TTATGCCCAT
ACACCGGATG CACTTGAAAA CATTTTAAAA TCGTTAAATG AAATCAAAGA AAATAGAATC
ATAGCAGTGT TTGGAGCAGG TGGCAACAGA GACAAGACAA AAAGACCATT GATGGGAGAG
ACGGCAGAAA AACTATCTGA TATTGTAATT CTAACATCTG ATAATCCAAG AAATGAAGAC
CCATTAAGTA TAATAGAAGA TATCTTAGAT GGAATAAAAG ATAAAGACAA AGTAATAACT
ATTGTAGATA GAAAACAGGC AATAGAAAAA GCTATCAGTT TAGCAAAAGA AAAAGATATA
ATTTTAATAG CAGGGAAAGG ACATGAAAAT TATCAGATAA TTGGCGATAA AATATTGCAT
TTTGACGATG CAGAAGTAGT AAAAGAAATT ATAGACGGAG GAAAAGGTGT TTAG
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| Protein sequence | MKLLKEILTD EKIIYGNQET VIEGITNNSK KVEKNYAFFA IKGTSVDGHN FIDEAIKNGA
SVIFIEDEKY VESLKGKNIT VVLTDNGRKS LALASNRFYD NPSEKLKVIA ITGTNGKTTT
SNLLAQYYEM AGYKVGVIGT INYRVGDEIL SSGHTTPDPV EWFKTLKVMK DKGADVVVAE
VSSHAADQYR VYSTKFHGGI FTNLTQDHLD YHQTMENYFL AKRRIFEQID EFNKEAIYSI
NVDDEYGRRI LDYLKNHLKV NDDKIITYGK TSEDFKILDY RLSLFETEFS YKYKDTLSKI
KTKLRGVFNI YNLSAAVSFL IKDGFDLKFL EEKALHLKPI KGRFEVIEGQ GFIVVIDYAH
TPDALENILK SLNEIKENRI IAVFGAGGNR DKTKRPLMGE TAEKLSDIVI LTSDNPRNED
PLSIIEDILD GIKDKDKVIT IVDRKQAIEK AISLAKEKDI ILIAGKGHEN YQIIGDKILH
FDDAEVVKEI IDGGKGV
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