| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1212 |
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| Symbol | |
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| ID | 6332558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1263159 |
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| End bp | 1264079 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642657496 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_001931377 |
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| Protein GI | 188997126 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAAAG TTGGTTATTT TTATGATGAT ATATATTTAG AACATGATAC AGGAATAGGT
CATCCAGAAT CTCCGGAAAG ACTTATTTAC ATAAATAAAT ATTTAGAACC TATAAAGGAT
AAATTAATCC ATCTAAAGCC AAGAAGAGCA TCTGCTAAGG AAATAACGTT GATACATGAT
ATTTACTATC CACAAGAAAT AATGGATTTT TGTGCTGCCG GTGGTGGATA TTTAGACCCG
GATACACACG TTGGAGAGTA TTCGTATGAA GCTGCTGTGA TGGCAGTAGG TGCGGGTCTT
GAAGCAATCG ATAATATCGT TAATGGAAAG ATAGAAAGGG CATTTTGTGC TGTAAGACCA
CCGGGTCATC ATGCAGAAAA AGATAAAGCA ATGGGATTTT GTATCTTTAA TAATATTGCT
ATAACAGCAA GATATGTACA GCAAAAAGGC TTTAATAAAG TTTTTATAAT AGATTTTGAT
GCCCACCATG GAAACGGTAC ACAAAAAGCT TTCTACGATG ATGACACTGT GTTTTACTTT
TCAACCCATG AATATCCCTT TTATCCGGGA ACCGGTTCAA AAAATGAAAA AGGAGTTGGA
AAAGGCTACG GATATACTTA TAATGTTCCA CTGCCCGCCG GTACAGGTGA TGAAGTCTAT
ACAGAAATTT ACAGTCAAAC CCTGCCAGAG CTTGTAAAGT CTTTTAATCC AGACATAATT
CTTGTTTCTG CCGGTTATGA CTTACATCAA GATGACCCAT TAACTTACTT AGAAGTATCA
ACAGAAGGAA TTGGAACGAT AGTAGAAAAT ATTTTAAAGT CAGCAGATGT TCCTTATGTC
TTCATGCTTG AAGGTGGGTA TAATCTAAAT GCTTTAGGTG AAAGTGTAAG ATTAACAATT
GAAAAAATGC TTTACATCTA A
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| Protein sequence | MKKVGYFYDD IYLEHDTGIG HPESPERLIY INKYLEPIKD KLIHLKPRRA SAKEITLIHD
IYYPQEIMDF CAAGGGYLDP DTHVGEYSYE AAVMAVGAGL EAIDNIVNGK IERAFCAVRP
PGHHAEKDKA MGFCIFNNIA ITARYVQQKG FNKVFIIDFD AHHGNGTQKA FYDDDTVFYF
STHEYPFYPG TGSKNEKGVG KGYGYTYNVP LPAGTGDEVY TEIYSQTLPE LVKSFNPDII
LVSAGYDLHQ DDPLTYLEVS TEGIGTIVEN ILKSADVPYV FMLEGGYNLN ALGESVRLTI
EKMLYI
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