| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1210 |
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| Symbol | |
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| ID | 6332556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1259886 |
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| End bp | 1262057 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642657494 |
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| Product | DNA polymerase B region |
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| Protein accession | YP_001931375 |
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| Protein GI | 188997124 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.219967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAT ATCAAATCCT TGATGTATAC TCTGACCAAA ATGGAATTAA CATATGGCTT
TACAATGAAA AAGAAAGAAT TCATATAAAA AAGCCATACC AACCTTTTTT CTATTTTAGA
AAGAATGAGT CAGTTAAACG TTTACTGCAG AAAAAATTTA AAAATATCAA GATTGTAAAA
GATATAAAAA TAGACCTGAT AGATGGAGAA ATAGAAGTTT ATAAAGTCAT CACACAAAAT
CCACTTACTT ATAATAAAAT AATCAGTTTT ATAAAATACT CAGACATTTT CACAGAGACA
GATTTTTACA ACATACAACT AAGCCCAGAA ACGCTTTTTA TGTTTGAGAA AAAAATATAT
CCATTTTGTA AATTAGAAAA AACAGAAAAA AATGGTCGCT GTTCTTTTAA AAAAATAGAT
GATTTAGATT TACTTGATTA TGAAATCCTT CCACTGCGGA TAATGTATAT TGATTTTGAG
CTCGGGATAG GAAAAGAAAA CTTAAGATTT TTAAGACACA TCCCTACATT AACTATCAGA
TTTAACGAAG ATGAAAAATC AATTGTGATA GATAATGATC TTGAATATCT ACAAGAACTT
TTAATAAAAA AAGACCCGGA TATAATCATA GCAAATTATG GAGATGATAT ATTAATACCA
AATCTTTTTG AAAAAGGACT AAAATTTTTA AACAGAAATA ATTTACCGGT AATAAAAAAA
GAAGGTAAAA GTTTTGTATC TTATGGTCAA ACTGTTTACA CTGCTGACAT GAGCTTACTT
CTTGGAAGAA TACATATAGA CTCAAGAAAC TCATTCTTTT ATAAAGAAGT AGGCTTAGAT
GGAATAATTG AATTATCAAG AATATCTTCC TTAGGAATGC AAGCGGTAGC AAGAACAACC
ATCGGAACGC CAATTACTTA TATGGAAATG AAAAATGCTT ATGAAAATAA CTTTCTCATA
CCGTACAAAA AAAACCAGCC GGAAGATTTT AAAACTCTTG AGCAGCTAAT AAAGATAGAC
AAAGGTGGTT TGACATTAAA ACCTTTAGTA GGACTATTTG AAAATGTGGC AGAATACGAT
TTTTTCTCTA TGTATCCATC AATCATAACA AATTATAATC TTTCTTATGA AACTATTAAC
TGTAAGCATC CAGAATGTAA AAAAACCTTA CCTTATACAA ATTATAGAAT CTGTACAAAA
AAGATAGGCA TTGTTCCACA AACATTAAAA TGGCTTCTTG AAAGAAGGCT TAAATATAAG
CAATTACTTA AAAAAGAAAA AAATCAGATT TATGATAATA GACAAAAAGC TTTAAAATGG
CTTTTAGTAG TTAGCTTTGG TTATCTTGGA TATAAAAACG CAGTTTTTGG AAGAATAGAA
TCACACGAAG CAACAACATC AATCGGAAGA CAGCTTATTA CTTTTGTAAA AGAGATTTTA
GAAGCAAAAG GCTTTAGAGT AATTCATATT CTTACCGATT CTATCTGGGT TTACAAACAT
GATTATACGA TAGATGATTA TAAAAAGATG GAAGAATATT TGAATAAAAG AATCAACGAA
AAATTTATTC CGGTGAATCC TGACGGAATA CCATTTAAGA TTTTACTGGA AGGTGTTTAT
GATTGGATAG TTTTTTTACC TTCAAAATCT AATTCCGTTG GTGTTTCTAA CCGTTATTTT
GGAAAGTTTA GCAATGGTGA GTTTAAATTT AGAGGAATAG ATTTAAGAAG AAGAGATGTT
CCAGAATTTA TTAAAAATTT TCAATTAGAA GTTTTTGAGC ATTTAGGCAA AGCAAAAAAC
AAAACAGAAT TCTTAAAGTT AATAAAAGAT ATAGATGAGA TATTCGACAA ACACAAACAA
AAATTAATGG AAGGAGATTT TTCATTAAAG GACTTAATAA TAAAAAAGAA AGTTTCCAAG
GATTCAAGTT CATATCAGAA AAGGACAGAT TTATCAGAAG TAGCCGGAAC TTTGCTAAAA
GAAGGCTTTA ATCTAAATCC GGGTGAAAGT GTTAATATCA TTTATATTCT TGATAAATAT
ATAAAAGCTA TGCCGCTTGA AATCTATCTG ACAAATCCAA AGCCAATAAA CATAGAAAAA
TACTTAAAAA TGCTTGAAGA ATCTAAAATT GGATTATTAC CAAAAAAGCT TTTTGGTAAT
GTATTAAGGT AA
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| Protein sequence | MKIYQILDVY SDQNGINIWL YNEKERIHIK KPYQPFFYFR KNESVKRLLQ KKFKNIKIVK
DIKIDLIDGE IEVYKVITQN PLTYNKIISF IKYSDIFTET DFYNIQLSPE TLFMFEKKIY
PFCKLEKTEK NGRCSFKKID DLDLLDYEIL PLRIMYIDFE LGIGKENLRF LRHIPTLTIR
FNEDEKSIVI DNDLEYLQEL LIKKDPDIII ANYGDDILIP NLFEKGLKFL NRNNLPVIKK
EGKSFVSYGQ TVYTADMSLL LGRIHIDSRN SFFYKEVGLD GIIELSRISS LGMQAVARTT
IGTPITYMEM KNAYENNFLI PYKKNQPEDF KTLEQLIKID KGGLTLKPLV GLFENVAEYD
FFSMYPSIIT NYNLSYETIN CKHPECKKTL PYTNYRICTK KIGIVPQTLK WLLERRLKYK
QLLKKEKNQI YDNRQKALKW LLVVSFGYLG YKNAVFGRIE SHEATTSIGR QLITFVKEIL
EAKGFRVIHI LTDSIWVYKH DYTIDDYKKM EEYLNKRINE KFIPVNPDGI PFKILLEGVY
DWIVFLPSKS NSVGVSNRYF GKFSNGEFKF RGIDLRRRDV PEFIKNFQLE VFEHLGKAKN
KTEFLKLIKD IDEIFDKHKQ KLMEGDFSLK DLIIKKKVSK DSSSYQKRTD LSEVAGTLLK
EGFNLNPGES VNIIYILDKY IKAMPLEIYL TNPKPINIEK YLKMLEESKI GLLPKKLFGN
VLR
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