| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1206 |
|---|
| Symbol | |
|---|
| ID | 6331462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1256839 |
|---|
| End bp | 1258512 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642657490 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001931371 |
|---|
| Protein GI | 188997120 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain
[TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000000960806 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACCT TGCAATGCCA ACTTGAGTTT GAAAATAGGC AAGATAAAGA GATTATATTA
GATTTAATGC GTAGATTCTC ATCAGCAAGT AGATACGCAT ATCAAAGATT ATTAGAAGGC
AAAAAAAGAA AAGATTTAAA AAAGCAGTTA TCAAGATTGT TTAATATAAA TACAAGATAT
TCAGATGATG CTATATTCTT AGCACAGTCA ATAATTTTGT TATACAAAGA AAGACAGCAA
AATCCAAAAA AAGTTATCTT TGGTTCAAGG AAATTATTTG AGCAACTAAA GAAAAATCAT
TTAACAGGAA AAAGAAGAAA AGAGTTAAAA GCAAAATGGA AAGAAAGCAG ACAAGGGAAT
TTGTATTCAA GAGGAGATAA ATCTAAGCAA GGAAATCTAA ATTTAAGATT TCATCGGATT
AATAATGAGC TTTACTTGAG AATAAACACA GGAGATAGAC AATATATCTA CGCAAGAGTA
ATTAGAAGCG TTAAAAGGGA AAAAAATAAA TGGATAGATT TTGTGTTTAT GTTAGAAAAT
GCATATCAGA CAGATGAATG GTTTGCGTAT AGTGTTAGAT TAAAAACAAA AAACAGCAAA
ATATACGCTT TTATATCCAT AGAAGAAAAA CTACCACCTA TTACAATCAA AAGAGACAAT
GGTATTATAG GCATAGATGT AAACGCATAT CCATTTCATC TTGCACTATC TTTTACAAGT
AAAGATGGAA ATTTAGAGAA ATATCAAAGC ATTAATTTAA ATGAATTATT AGAAGCAAAC
TCAGAAAAAA GACAGTACTT AGAATGGCTA ATAGCACATA AGATAATAAA GATAGCAAAA
AAAGAGAATA AAGCTATCGC TATCGAAAAT TTAAATAAAC TACCAAAAGG TAAAAGAGGA
GATGGATTTG CAAAGCTAAG AAGTAAATTA CAGAAATGGA GCTATAAAAG ATTATTAGAC
AAAATAGAAA TATTAGCAAA AAGAAACGGG ATAGAAATAA GAAAAGTCAA TCCTGCATAT
ACATCAGTAA TTGGAAAGCT AAAATACTCG CCACAATACA ACATAGACAA AGACATAGCA
GGAGCTTACG TAATAGCAAG AAGAGGATTA GGATATAAAG AAAAATTACC AAAAAATTAT
AAAGAACTGT TAAATGATAT TGATTTTCTG TCATACACCA TCGCAAGAAT TGAAGATAGT
ATTACAAAAT TAAAACAAAA GATAAAAGAA GAGAAAAATG AATATAAGAG AAGCAAAATT
AAAAGCAAAT TAGCAAAACT AAGAAAAAAC CTAAAAACAC TACAAAACCA CGTCTCACGT
TTCACGTCTC CCGTTTCACG TTCAGAAAGT GGAAAGAGCA AGACAGCTAC CCAACATCCT
GTCAACCAAC GGAAGGAACA GGTGAGGGGT CTGCCTACAG GTAGACATAA AAGCTGGCAA
GTTCTTTCCA TAGCCTTAGC CTTCTGCTGT TTTGAAAGAT CGTATAGAGA TCTTTCTCCT
TTGAATCGTG TAATCGTTTC AAAGGATTGG ACAGTAGTGG CTAATAGGTT AGCTCCTGTA
CTTGGTGCAG GGACTATGAC ACTTCCCAAA TACCGCCTGT TGGGGTCGGA AGTGTCTGAA
ATGGCGGAAT ACAAATACCC CAACCCAAGC TGTAGTTTTA TACAGTTTGG TTGA
|
|---|
| Protein sequence | MITLQCQLEF ENRQDKEIIL DLMRRFSSAS RYAYQRLLEG KKRKDLKKQL SRLFNINTRY
SDDAIFLAQS IILLYKERQQ NPKKVIFGSR KLFEQLKKNH LTGKRRKELK AKWKESRQGN
LYSRGDKSKQ GNLNLRFHRI NNELYLRINT GDRQYIYARV IRSVKREKNK WIDFVFMLEN
AYQTDEWFAY SVRLKTKNSK IYAFISIEEK LPPITIKRDN GIIGIDVNAY PFHLALSFTS
KDGNLEKYQS INLNELLEAN SEKRQYLEWL IAHKIIKIAK KENKAIAIEN LNKLPKGKRG
DGFAKLRSKL QKWSYKRLLD KIEILAKRNG IEIRKVNPAY TSVIGKLKYS PQYNIDKDIA
GAYVIARRGL GYKEKLPKNY KELLNDIDFL SYTIARIEDS ITKLKQKIKE EKNEYKRSKI
KSKLAKLRKN LKTLQNHVSR FTSPVSRSES GKSKTATQHP VNQRKEQVRG LPTGRHKSWQ
VLSIALAFCC FERSYRDLSP LNRVIVSKDW TVVANRLAPV LGAGTMTLPK YRLLGSEVSE
MAEYKYPNPS CSFIQFG
|
|---|
| |