Gene SYO3AOP1_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1200 
Symbol 
ID6331856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1250225 
End bp1251184 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content26% 
IMG OID642657484 
Productglycosyl transferase family 2 
Protein accessionYP_001931365 
Protein GI188997114 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0281003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGAAA AAGAATTGGT AAGCATTGTA GTGCCATCTT TCAATCATGG AAAGTATATA 
GATAAAACTA TCAAAAGCGT AATGAATCAG ACATATGAAA ATATTGAGCT TATAGTTATA
GATGATAAAT CTTCTGATAA TTCCATTGAT ATTATTAAAT CCTTGGAATC TGACATAAAA
AACAGGTTTG ACAACTATCA ATTTATTTTT AAGGATACTA ATTTAGGACT AACAGACTCT
TTAAACAAAG GTTTATACTT GGCAAAAGGA AAGTATTTTA CTTATATTCA ATCTGACGAT
GTTATGCATA AAGATAAAAT TTATTTAAGC GTAGAAACGT TTAAAAAGCT CAGTGATGAT
TACTCTTTTA TATTTTCCGA TGTGTTTTTT ATAGACGAGG AAGATAGTCT AACTTATTAT
ATATCAGAAG GAAAAAAGTT TGATACTTGG ATGAAATTGA TGAGATACCA CTATCCTTGG
TTAAACAGTA AAGATATTTG CCGCTATAGG TTTTTAATAC GGGGAAATTT TATTCCTGCA
ATGGGAAATT TTTTTAGAAA AAGATGGCTT GAAAAAGTAA ACGGGTGGAG TGAATTTCTT
TACTACAAAG ATAAAAAATT AAAGTTCATT AACGAAGACT ATCCTATGTG GCTAAAATTA
TCAAAGGTAT CAAAATTTTA TTTTTTAGAT AATCAGTTAG CTTATTTCAG AATTCATAAG
AAAAATACAA GTACAACAAG AGCAAAAGAT TCAAATATTG AAGTTTTATA TCTAATACTA
AATGAGTATG AATACTGTAA AGAAAATGGT TATATAAAAG ACTTAGAAAT TAATCTTTTT
AAATACTTGA AAAGAGCAAA AATAAGTCTT AAAGAAAAAG TAAAAATTCT AACAGAATAC
AATTTATCGA AAGATTTTAT AAAATGGCGT TTAAGAAAGA GTGTTCCAAA ATTCTCGTAA
 
Protein sequence
MYEKELVSIV VPSFNHGKYI DKTIKSVMNQ TYENIELIVI DDKSSDNSID IIKSLESDIK 
NRFDNYQFIF KDTNLGLTDS LNKGLYLAKG KYFTYIQSDD VMHKDKIYLS VETFKKLSDD
YSFIFSDVFF IDEEDSLTYY ISEGKKFDTW MKLMRYHYPW LNSKDICRYR FLIRGNFIPA
MGNFFRKRWL EKVNGWSEFL YYKDKKLKFI NEDYPMWLKL SKVSKFYFLD NQLAYFRIHK
KNTSTTRAKD SNIEVLYLIL NEYEYCKENG YIKDLEINLF KYLKRAKISL KEKVKILTEY
NLSKDFIKWR LRKSVPKFS